RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TRIM73Q86UV7 250 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 AMIGO1Q86WK6 493 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 ZBTB2Q8N680 514 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 FDCSPQ8NFU4 85 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 TFGQ92734 400 aaPredicted RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 C19orf43Q9BQ61 176 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 NUDT9Q9BW91 350 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 MVB12BQ9H7P6 319 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 SYTL2Q9HCH5 934 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 LUC7LQ9NQ29 371 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 NLE1Q9NVX2 485 aaPredicted RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 FEZ2Q9UHY8 353 aaPredicted RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 VPS4AQ9UN37 437 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 ICKQ9UPZ9 632 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 REXO2Q9Y3B8 237 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 SNRNP200O75643 2136 aaKnown RBP16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 CCDC88CQ9P219 2028 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 CCDC78A2IDD5 438 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 A6NL46 340 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 C2orf74A8MZ97 194 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 E7EQ34 232 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 H7C0S8 307 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 ZNF185O15231 689 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 ZNF749O43361 778 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 METTL18O95568 372 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 CD151P48509 253 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 VAV2P52735 878 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 NAP1L1P55209 391 aaKnown RBP16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 ATP1A4Q13733 1029 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 POU6F1Q14863 301 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 NCF4Q15080 339 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 DEFB110Q30KQ9 67 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 ZNF385CQ66K41 422 aaPredicted RBP16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 HIST2H2BCQ6DN03 193 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 GALNT11Q8NCW6 608 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 OR5AR1Q8NGP9 310 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 PPP1R2P1Q96PQ5 205 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 MFRPQ9BY79 579 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 SLC7A5P2Q9GIP4 190 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 LACRTQ9GZZ8 138 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 VPS37BQ9H9H4 285 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 FAM60AQ9NP50 221 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 SERTAD3Q9UJW9 196 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 ZNF451Q9Y4E5 1061 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 MAP4K5Q9Y4K4 846 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 EPN1Q9Y6I3 576 aaPredicted RBP16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 PRSS21Q9Y6M0 314 aa16.54■□□□□ 0.24
RPUSD4-207ENST00000532800 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 OR51F1A6NGY5 319 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 HCRTR1O43613 425 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 TJP3O95049 919 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 RPA4Q13156 261 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 RAPSNQ13702 412 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 SPESP1Q6UW49 350 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 NAPRTQ6XQN6 538 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 ARHGEF18Q6ZSZ5 1173 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 TAB3Q8N5C8 712 aaPredicted RBP16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 LRRC57Q8N9N7 239 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 FAM71DQ8N9W8 422 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 Q8NA96 180 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 CDKN2AIPNLQ96HQ2 116 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 LRRC4CQ9HCJ2 640 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 SMARCAL1Q9NZC9 954 aa16.53■□□□□ 0.24
RPUSD4-207ENST00000532800 AGFG2O95081 481 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 CTSBP07858 339 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 RNF224P0DH78 156 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 UGT2B7P16662 529 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 GDF10P55107 478 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 CACNG1Q06432 222 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 BRD3Q15059 726 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 ZIC1Q15915 447 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 PARP6Q2NL67 630 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 JMJD6Q6NYC1 403 aaPredicted RBP16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 ZNF449Q6P9G9 518 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 C19orf47Q8N9M1 422 aaKnown RBP16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 ACRBPQ8NEB7 543 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 STYXQ8WUJ0 223 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 LRRC45Q96CN5 670 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 LRRC40Q9H9A6 602 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 SPHK1Q9NYA1 384 aa16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 R3HDM2Q9Y2K5 976 aaKnown RBP16.52■□□□□ 0.24
RPUSD4-207ENST00000532800 ESPL1Q14674 2120 aa16.52■□□□□ 0.23
RPUSD4-207ENST00000532800 C9J4A7 227 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 H3BMH7 237 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 MAP3K7O43318 606 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 TPBGLP0DKB5 382 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 CBSLP0DN79 551 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 OTX2P32243 289 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 CBSP35520 551 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 CETN2P41208 172 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 GABRA4P48169 554 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 FOXL2P58012 376 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 INPP5JQ15735 1006 aaPredicted RBP16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 FHL5Q5TD97 284 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 C1orf189Q5VU69 101 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 SLC6A19Q695T7 634 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 UNC5AQ6ZN44 842 aa16.51■□□□□ 0.23
RPUSD4-207ENST00000532800 MED25Q71SY5 747 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms