RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SH3D21A4FU49 640 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 M0QYT0 321 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ACOX3O15254 700 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 UGT2B11O75310 529 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 MICAL2O94851 1124 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 LSM8O95777 96 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TBX18O95935 607 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 IL6P05231 212 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CHRNGP07510 517 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 RBP1P09455 135 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ITGA2P17301 1181 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 GPD1P21695 349 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TALDO1P37837 337 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF132P52740 706 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP4F2P78329 520 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP4F3Q08477 520 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ELP6Q0PNE2 266 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 KLF1Q13351 362 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 BTN1A1Q13410 526 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 C1DQ13901 141 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM214AQ32MH5 1076 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TEX44Q53QW1 395 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TFAP2DQ7Z6R9 452 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PIGZQ86VD9 579 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 GALNT13Q8IUC8 556 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 LGI2Q8N0V4 545 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TTC9BQ8N6N2 239 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CDYL2Q8N8U2 506 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PSD4Q8NDX1 1056 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 C3orf58Q8NDZ4 430 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SHKBP1Q8TBC3 707 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ANKRD49Q8WVL7 239 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ZUFSPQ96AP4 578 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PHF21BQ96EK2 531 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 C19orf60Q96EN9 201 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 DIRAS2Q96HU8 199 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SPATA9Q9BWV2 254 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 MAGEL2Q9UJ55 1249 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHGB6Q9Y5F9 930 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ABHD14A-ACY1A0A1B0GW23 586 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PAHP00439 452 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 C4BPAP04003 597 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CSF2P04141 144 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 GALTP07902 379 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CNPP09543 421 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP4B1P13584 511 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 KCNA5P22460 613 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 KELP23276 732 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CBX5P45973 191 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SULT1E1P49888 294 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ALDH3A2P51648 485 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 GDF10P55107 478 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CDC20Q12834 499 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 COX10Q12887 443 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ACOX1Q15067 660 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 EML3Q32P44 896 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 DCLRE1AQ6PJP8 1040 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 NPNTQ6UXI9 565 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 IKBIPQ70UQ0 350 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 KRT74Q7RTS7 529 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF605Q86T29 641 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PHF13Q86YI8 300 aaPredicted RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC22A9Q8IVM8 553 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 AADATQ8N5Z0 425 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PHF10Q8WUB8 498 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TFAP2BQ92481 460 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TEKT5Q96M29 485 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 MFSD14AQ96MC6 490 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 RIPOR3Q96MK2 946 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 IL12RB2Q99665 862 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ELOVL4Q9GZR5 314 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM168Q9H0V1 697 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ERVMER34-1Q9H9K5 563 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CNTN3Q9P232 1028 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SIX4Q9UIU6 781 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHGA7Q9Y5G6 932 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 TEX264Q9Y6I9 313 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 U3KQV3 271 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC12A8A0AV02 714 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PRSS44E7EML9 344 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 NUPL2O15504 423 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 GMDSO60547 372 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 LRIG2O94898 1065 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 HNRNPLP14866 589 aaKnown RBP eCLIP6.68□□□□□ -1.346e-10■□□□□ 8
TGFBR3-209ENST00000532540 LBPP18428 481 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 ARSFP54793 590 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 NOMO3P69849 1222 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 LIPEQ05469 1076 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDH1Q08174 1060 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 CSHL1Q14406 222 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 PCLAFQ15004 111 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 NCF4Q15080 339 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SOWAHAQ2M3V2 549 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC36A3Q495N2 470 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 UBXN11Q5T124 520 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 STEAP3Q658P3 488 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 METTL4Q8N3J2 472 aa6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 RTL3Q8N8U3 475 aaKnown RBP6.68□□□□□ -1.34
TGFBR3-209ENST00000532540 UTP15Q8TED0 518 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms