RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PCDHB11Q9Y5F2 797 aa15.42■□□□□ 0.06
PPFIA1-222ENST00000532504 KRT87PA6NCN2 255 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 ZNF155Q12901 538 aaPredicted RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 INTS11Q5TA45 600 aaKnown RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 ZNF549Q6P9A3 640 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 UBR7Q8N806 425 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 CCDC134Q9H6E4 229 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 TEX264Q9Y6I9 313 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 COX4I1P13073 169 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 MAOBP27338 520 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 KIR3DL1P43629 444 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 CLDN2P57739 230 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 HSPB3Q12988 150 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 FAM109BQ6ICB4 259 aaPredicted RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 VN1R5Q7Z5H4 357 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 PMEPA1Q969W9 287 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 ITCHQ96J02 903 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 UROSP10746 265 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 POMZP3Q6PJE2 187 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 SEMA3GQ9NS98 782 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 MAT2BQ9NZL9 334 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 DOCK1Q14185 1865 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 KNL1Q8NG31 2342 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 CAPN8A6NHC0 703 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 SNX3O60493 162 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 SNUPNO95149 360 aaKnown RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 PIK3R1P27986 724 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 GPX6P59796 221 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 HYAL2Q12891 473 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 GRIN2CQ14957 1233 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 CAND1Q86VP6 1230 aaKnown RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 PPIEQ9UNP9 301 aaKnown RBP15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 PSAT1Q9Y617 370 aa15.41■□□□□ 0.06
PPFIA1-222ENST00000532504 LAMB1P07942 1786 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 H3BN98 237 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 GRIA3P42263 894 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 MASP1P48740 699 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 MAPK10P53779 464 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 PSAPL1Q6NUJ1 521 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 RNF44Q7L0R7 432 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 AVL9Q8NBF6 648 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 RCN3Q96D15 328 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 SBF2Q86WG5 1849 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 C9J4A7 227 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 PIP5K1BO14986 540 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ERI3O43414 337 aaKnown RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 SCN2BO60939 215 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 OAS1P00973 400 aaKnown RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 HOXD9P28356 352 aaPredicted RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 AQP1P29972 269 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ADGRG2Q8IZP9 1017 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ZNF781Q8N8C0 355 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 RIN3Q8TB24 985 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 HSPA12BQ96MM6 686 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 BTBD10Q9BSF8 475 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 NDC1Q9BTX1 674 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 PTCHD3Q3KNS1 767 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 WLSQ5T9L3 541 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ZC3H14Q6PJT7 736 aaKnown RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 DCUN1D3Q8IWE4 304 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 TMEFF1Q8IYR6 380 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ARFGAP1Q8N6T3 406 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 JSRP1Q96MG2 331 aaPredicted RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ANGPT4Q9Y264 503 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 WNK3Q9BYP7 1800 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 AGXTP21549 392 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 PKDCCQ504Y2 493 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 NADSYN1Q6IA69 706 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 AGTRAPQ6RW13 159 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ANKRD46Q86W74 232 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 ZNF761Q86XN6 746 aaPredicted RBP15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 POLR1DQ9Y2S0 133 aa15.4■□□□□ 0.06
PPFIA1-222ENST00000532504 BIKQ13323 160 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 KIAA1161Q6NSJ0 714 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 GK5Q6ZS86 529 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 RELTQ969Z4 430 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 ZNF778Q96MU6 729 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 BTBD9Q96Q07 612 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 ARAP2Q8WZ64 1704 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 RREB1Q92766 1687 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 SPINT3P49223 89 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 AP1S2P56377 157 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 RAB8AP61006 207 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 MPP7Q5T2T1 576 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 THOC6Q86W42 341 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 CENPTQ96BT3 561 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 CHFRQ96EP1 664 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 PHF7Q9BWX1 381 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 CRISPLD2Q9H0B8 497 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 FBRSQ9HAH7 460 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 ALKBH4Q9NXW9 302 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 GALPQ9UBC7 116 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 N6AMT1Q9Y5N5 214 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 RGSL1A5PLK6 1076 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 EDF1O60869 148 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms