RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TBC1D21Q8IYX1 336 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 ADGRF3Q8IZF5 1079 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 AGBL5Q8NDL9 886 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 OR4E2Q8NGC2 313 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 OR5K2Q8NHB8 316 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 FBXO25Q8TCJ0 367 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 CALML6Q8TD86 181 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 FGF11Q92914 225 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 PMEPA1Q969W9 287 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 CFAP36Q96G28 342 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 TGM7Q96PF1 710 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 ZDHHC18Q9NUE0 388 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 HRASLS2Q9NWW9 162 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 SIDT1Q9NXL6 827 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 VPS9D1Q9Y2B5 631 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 RAXQ9Y2V3 346 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 PCDHGA7Q9Y5G6 932 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 SDK2Q58EX2 2172 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 SPTBP11277 2137 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 OR6C74A6NCV1 312 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 B4E171 279 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 H3BMM5 538 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 NDC80O14777 642 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 KPNA5O15131 536 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PFDN6O15212 129 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 EIF3HO15372 352 aaKnown RBP eCLIP13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 NVLO15381 856 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 APOA4P06727 396 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 EIF2S3P41091 472 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 TSPAN7P41732 249 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 CARSP49589 748 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PLTPP55058 493 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 GUCY2DQ02846 1103 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 ABRQ12979 859 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 ACSBG2Q5FVE4 666 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 SNAP47Q5SQN1 464 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 ZNF449Q6P9G9 518 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 FOXR1Q6PIV2 292 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PRSS42Q7Z5A4 293 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 KIF18AQ8NI77 898 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 FLVCR1-AS1Q8TAF5 88 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 FAM136AQ96C01 138 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PPM1MQ96MI6 270 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 MCMBPQ9BTE3 642 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 AARSD1Q9BTE6 412 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 HGH1Q9BTY7 390 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 TSSK1BQ9BXA7 367 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 SMYD2Q9NRG4 433 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 KLHL42Q9P2K6 505 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PISDQ9UG56 409 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 ICKQ9UPZ9 632 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 ASF1AQ9Y294 204 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PCDHGA3Q9Y5H0 932 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 NFS1Q9Y697 457 aa13.54□□□□□ -0.24
TSPAN4-220ENST00000532375 PCM1Q15154 2024 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 A0A087WV48 116 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 ESYT3A0FGR9 886 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 MATN4O95460 622 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 CHRM3P20309 590 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 RBMS1P29558 406 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 ATP5DP30049 168 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 SLC5A2P31639 672 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 MC2RQ01718 297 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 CALCOCO2Q13137 446 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 PLCL1Q15111 1095 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 KYNUQ16719 465 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 SYTL3Q4VX76 610 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 UNC5DQ6UXZ4 953 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 KIAA0408Q6ZU52 694 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 OTOAQ7RTW8 1153 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 ZBTB2Q8N680 514 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 LCN9Q8WX39 176 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 KCNJ9Q92806 393 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 USP7Q93009 1102 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 ZDHHC12Q96GR4 267 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 SLC41A2Q96JW4 573 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 MAP3K3Q99759 626 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 PHACTR1Q9C0D0 580 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 TRIT1Q9H3H1 467 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 ZNF768Q9H5H4 540 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 XKR8Q9H6D3 395 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 DHRS7Q9Y394 339 aa13.53□□□□□ -0.24
TSPAN4-220ENST00000532375 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.24
TSPAN4-220ENST00000532375 EFCAB7A8K855 629 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms