RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 SLC29A2Q14542 456 aa21.7■■□□□ 1.06
LRRK1-208ENST00000532029 N4BP2L1Q5TBK1 243 aaPredicted RBP21.7■■□□□ 1.06
LRRK1-208ENST00000532029 EMBQ6PCB8 327 aa21.7■■□□□ 1.06
LRRK1-208ENST00000532029 TAOK1Q7L7X3 1001 aa21.7■■□□□ 1.06
LRRK1-208ENST00000532029 PAFAH2Q99487 392 aa21.7■■□□□ 1.06
LRRK1-208ENST00000532029 CCDC77Q9BR77 488 aa21.7■■□□□ 1.06
LRRK1-208ENST00000532029 GOLGA4Q13439 2230 aaKnown RBP21.7■■□□□ 1.06
LRRK1-208ENST00000532029 A0A1W2PQM1 296 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 TCEA3O75764 348 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 UBXN7O94888 489 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 ITGA2BP08514 1039 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 CD1CP29017 333 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 IL2P60568 153 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 PRKG2Q13237 762 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 NAA30Q147X3 362 aaPredicted RBP21.69■■□□□ 1.06
LRRK1-208ENST00000532029 CLPPQ16740 277 aaPredicted RBP21.69■■□□□ 1.06
LRRK1-208ENST00000532029 MAP9Q49MG5 647 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 NKAIN2Q5VXU1 208 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 KLHL35Q6PF15 583 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 DCUN1D3Q8IWE4 304 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 MYO1HQ8N1T3 1032 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 AENQ8WTP8 325 aaKnown RBP21.69■■□□□ 1.06
LRRK1-208ENST00000532029 SLC44A1Q8WWI5 657 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 JPH3Q8WXH2 748 aaPredicted RBP21.69■■□□□ 1.06
LRRK1-208ENST00000532029 LINGO1Q96FE5 620 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 POPDC3Q9HBV1 291 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 SYTL2Q9HCH5 934 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 RAB21Q9UL25 225 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 RUVBL2Q9Y230 463 aaKnown RBP21.69■■□□□ 1.06
LRRK1-208ENST00000532029 NFS1Q9Y697 457 aa21.69■■□□□ 1.06
LRRK1-208ENST00000532029 NTN3O00634 580 aaPredicted RBP21.68■■□□□ 1.06
LRRK1-208ENST00000532029 PROS1P07225 676 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 STMN1P16949 149 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 TYRP1P17643 537 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 CCNFP41002 786 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 SERPINB9P50453 376 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 HES3Q5TGS1 186 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 RBM44Q6ZP01 1051 aaKnown RBP21.68■■□□□ 1.06
LRRK1-208ENST00000532029 USP53Q70EK8 1073 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 PIWIL4Q7Z3Z4 852 aaKnown RBP21.68■■□□□ 1.06
LRRK1-208ENST00000532029 SPNS2Q8IVW8 549 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 OR52E1Q8NGJ3 308 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 MAGEC3Q8TD91 643 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 EEF1AKMT1Q8WVE0 214 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 LCN9Q8WX39 176 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 DPYSL5Q9BPU6 564 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 CAB39LQ9H9S4 337 aa21.68■■□□□ 1.06
LRRK1-208ENST00000532029 ATXN7L1Q9ULK2 861 aaPredicted RBP21.68■■□□□ 1.06
LRRK1-208ENST00000532029 CASC3O15234 703 aaKnown RBP21.67■■□□□ 1.06
LRRK1-208ENST00000532029 MATN4O95460 622 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 CPNE6O95741 557 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 MT-CO3P00414 261 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 CATP04040 527 aaKnown RBP21.67■■□□□ 1.06
LRRK1-208ENST00000532029 PGGT1BP53609 377 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 FOXC1Q12948 553 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 MROH9Q5TGP6 573 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 RAB44Q7Z6P3 723 aaPredicted RBP21.67■■□□□ 1.06
LRRK1-208ENST00000532029 TMPRSS12Q86WS5 348 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 GALNT15Q8N3T1 639 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 CHCHD4Q8N4Q1 142 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 NKAPQ8N5F7 415 aaKnown RBP21.67■■□□□ 1.06
LRRK1-208ENST00000532029 NCSTNQ92542 709 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 EPB41L4BQ9H329 900 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 SRMSQ9H3Y6 488 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 TFB2MQ9H5Q4 396 aaKnown RBP21.67■■□□□ 1.06
LRRK1-208ENST00000532029 GPAMQ9HCL2 828 aa21.67■■□□□ 1.06
LRRK1-208ENST00000532029 D6RAR5 112 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 KRT38O76015 456 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 C1orf105O95561 183 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 ZNF37AP17032 561 aaPredicted RBP21.66■■□□□ 1.06
LRRK1-208ENST00000532029 BDKRB1P46663 353 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 SQSTM1Q13501 440 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 BMPR2Q13873 1038 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 ZNF460Q14592 562 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 CYHR1Q6ZMK1 362 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 OOSP2Q86WS3 158 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 CEP97Q8IW35 865 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 OR4E2Q8NGC2 313 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 CAVIN3Q969G5 261 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 RAD51AP1Q96B01 352 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 DEPDC7Q96QD5 511 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 RDH14Q9HBH5 336 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 ZNF180Q9UJW8 692 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 CLCA2Q9UQC9 943 aa21.66■■□□□ 1.06
LRRK1-208ENST00000532029 FAM221BA6H8Z2 402 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 PHGDHO43175 533 aaKnown RBP21.65■■□□□ 1.06
LRRK1-208ENST00000532029 PSIP1O75475 530 aaKnown RBP21.65■■□□□ 1.06
LRRK1-208ENST00000532029 JUPP14923 745 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 CNTFP26441 200 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 MAP4P27816 1152 aaKnown RBP21.65■■□□□ 1.06
LRRK1-208ENST00000532029 SHMT2P34897 504 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 CAPZBP47756 277 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 CLDN6P56747 220 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 RAB10P61026 200 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 LGSNQ5TDP6 509 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 CDCP2Q5VXM1 449 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 ARMC6Q6NXE6 501 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 RAPH1Q70E73 1250 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 ERMP1Q7Z2K6 904 aa21.65■■□□□ 1.06
LRRK1-208ENST00000532029 AMIGO1Q86WK6 493 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms