RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 TFGQ92734 400 aaPredicted RBP11□□□□□ -0.65
VPS28-214ENST00000531032 LRRC45Q96CN5 670 aa11□□□□□ -0.65
VPS28-214ENST00000531032 NRTNQ99748 197 aa11□□□□□ -0.65
VPS28-214ENST00000531032 HGH1Q9BTY7 390 aa11□□□□□ -0.65
VPS28-214ENST00000531032 RBSNQ9H1K0 784 aa11□□□□□ -0.65
VPS28-214ENST00000531032 NLE1Q9NVX2 485 aaPredicted RBP11□□□□□ -0.65
VPS28-214ENST00000531032 ACTR10Q9NZ32 417 aa11□□□□□ -0.65
VPS28-214ENST00000531032 SERTAD3Q9UJW9 196 aa11□□□□□ -0.65
VPS28-214ENST00000531032 MAP4K5Q9Y4K4 846 aa11□□□□□ -0.65
VPS28-214ENST00000531032 SPTBN1Q01082 2364 aaKnown RBP10.99□□□□□ -0.65
VPS28-214ENST00000531032 RP1L1Q8IWN7 2480 aaPredicted RBP10.99□□□□□ -0.65
VPS28-214ENST00000531032 FER1L5A0AVI2 2057 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 SEC16AO15027 2179 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 BTNL10A8MVZ5 291 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 E7EQ34 232 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 H3BMH7 237 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 MAP3K7O43318 606 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 AP2A2O94973 939 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 HBQ1P09105 142 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PRSS56P0CW18 603 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PVRP15151 417 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 GNLYP22749 145 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PSMA3P25788 255 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 CACNG1Q06432 222 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 DBN1Q16643 649 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PARP6Q2NL67 630 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PTCHD3Q3KNS1 767 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 ZRANB3Q5FWF4 1079 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 AADACL2Q6P093 401 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 ZNF449Q6P9G9 518 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 SPESP1Q6UW49 350 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 CDHR3Q6ZTQ4 885 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 HPS6Q86YV9 775 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PIANPQ8IYJ0 282 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 CLDN19Q8N6F1 224 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 LRRC57Q8N9N7 239 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 GLIS1Q8NBF1 620 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 FDCSPQ8NFU4 85 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 MRFAP1L1Q96HT8 127 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 PANX2Q96RD6 677 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 DHRS4Q9BTZ2 278 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 NUDT9Q9BW91 350 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 KLHL25Q9H0H3 589 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 XKR8Q9H6D3 395 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 LRRC40Q9H9A6 602 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 ICKQ9UPZ9 632 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 DUSP10Q9Y6W6 482 aa10.99□□□□□ -0.65
VPS28-214ENST00000531032 SOWAHDA6NJG2 315 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 GOLGA6L6A8MZA4 724 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 C9J4A7 227 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 LIN7AO14910 233 aaPredicted RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 ZNF749O43361 778 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 DPM1O60762 260 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 KLF7O75840 302 aaPredicted RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 CETN2P41208 172 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 RRADP55042 308 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 PRKG2Q13237 762 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 ATP1A4Q13733 1029 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 FHL5Q5TD97 284 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 JMJD6Q6NYC1 403 aaPredicted RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 PACS1Q6VY07 963 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 ARHGEF18Q6ZSZ5 1173 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 TAS2R42Q7RTR8 314 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 C19orf47Q8N9M1 422 aaKnown RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 FAM71DQ8N9W8 422 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 Q8NA96 180 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 OR5AR1Q8NGP9 310 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 STYXQ8WUJ0 223 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS28-214ENST00000531032 TCTN2Q96GX1 697 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 CDKN2AIPNLQ96HQ2 116 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 SMAD5Q99717 465 aaKnown RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 SLC7A5P2Q9GIP4 190 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 CHRNA10Q9GZZ6 450 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 LRRC4CQ9HCJ2 640 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 FAM60AQ9NP50 221 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 G3BP2Q9UN86 482 aaKnown RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 PADI2Q9Y2J8 665 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 REXO2Q9Y3B8 237 aaKnown RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 EPN1Q9Y6I3 576 aaPredicted RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 NBPF19A0A087WUL8 3843 aa10.98□□□□□ -0.65
VPS28-214ENST00000531032 PRRC2CQ9Y520 2896 aaKnown RBP10.98□□□□□ -0.65
VPS28-214ENST00000531032 ICE1Q9Y2F5 2266 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 GRID2IPA4D2P6 1211 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 QSOX1O00391 747 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 ZNF185O15231 689 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 AGFG2O95081 481 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 METTL18O95568 372 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 UGT2B7P16662 529 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 TPH1P17752 444 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 AGXTP21549 392 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 ACADLP28330 430 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 SHMT2P34897 504 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 NSG1P42857 185 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 GABRA4P48169 554 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 KLF1Q13351 362 aaPredicted RBP10.97□□□□□ -0.65
VPS28-214ENST00000531032 ITIH4Q14624 930 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 POU6F1Q14863 301 aa10.97□□□□□ -0.65
VPS28-214ENST00000531032 INPP5JQ15735 1006 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms