RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ZC3H14Q6PJT7 736 aaKnown RBP10.4□□□□□ -0.75
SOX6-213ENST00000530378 RPS27LQ71UM5 84 aaKnown RBP10.4□□□□□ -0.75
SOX6-213ENST00000530378 GATAD2AQ86YP4 633 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 C10orf107Q8IVU9 208 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 TMEM151AQ8N4L1 468 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 DENND1AQ8TEH3 1009 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 DYDC1Q8WWB3 177 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 KIAA1191Q96A73 305 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 ESAMQ96AP7 390 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 SKA1Q96BD8 255 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 PHF21BQ96EK2 531 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 ATOH8Q96SQ7 321 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 INSM2Q96T92 566 aaPredicted RBP10.4□□□□□ -0.75
SOX6-213ENST00000530378 EGFL8Q99944 293 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 MRPL57Q9BQC6 102 aaKnown RBP10.4□□□□□ -0.75
SOX6-213ENST00000530378 GTPBP2Q9BX10 602 aaKnown RBP10.4□□□□□ -0.75
SOX6-213ENST00000530378 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 TRNAU1APQ9NX07 287 aaKnown RBP10.4□□□□□ -0.75
SOX6-213ENST00000530378 FAM53CQ9NYF3 392 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 CD274Q9NZQ7 290 aa10.4□□□□□ -0.75
SOX6-213ENST00000530378 OTOGLQ3ZCN5 2332 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 SNRNP200O75643 2136 aaKnown RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 LRRC14BA6NHZ5 514 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 PRR19A6NJB7 356 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 PRR5-ARHGAP8B1AHC4 643 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 G3V2L1 256 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 IFRD1O00458 451 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 TM9SF1O15321 606 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 KERAO60938 352 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 MPC1LP0DKB6 136 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 MYL2P10916 166 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 GFAPP14136 432 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 SLC26A3P40879 764 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 ETV4P43268 484 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 AGTR2P50052 363 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 TSTA3Q13630 321 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 PPP1R3AQ16821 1122 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 DUOXA1Q1HG43 343 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 FAM219BQ5XKK7 198 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 CCDC91Q7Z6B0 441 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 ADAMTSL2Q86TH1 951 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 ZNF761Q86XN6 746 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 GPSM1Q86YR5 675 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 C2orf73Q8N5S3 287 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 PTGR2Q8N8N7 351 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 FAM46DQ8NEK8 389 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 GPBAR1Q8TDU6 330 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 ASB11Q8WXH4 323 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 TFGQ92734 400 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 PDLIM5Q96HC4 596 aaKnown RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 FOPNLQ96NB1 174 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 IL17FQ96PD4 163 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 GSDMCQ9BYG8 508 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 DPEP2Q9H4A9 486 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 TFB2MQ9H5Q4 396 aaKnown RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 INTS9Q9NV88 658 aaKnown RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 KLHL42Q9P2K6 505 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 DOLKQ9UPQ8 538 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 PDE10AQ9Y233 779 aa10.39□□□□□ -0.75
SOX6-213ENST00000530378 DNMT3AQ9Y6K1 912 aaPredicted RBP10.39□□□□□ -0.75
SOX6-213ENST00000530378 A8MT66 165 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 AQP9O43315 295 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 DLX3O60479 287 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 PIAS2O75928 621 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 EPN2O95208 641 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 SIX3O95343 332 aaPredicted RBP10.38□□□□□ -0.75
SOX6-213ENST00000530378 MATN4O95460 622 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 RBP1P09455 135 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 NEFHP12036 1026 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 CPA3P15088 417 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 BGNP21810 368 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ACADLP28330 430 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ALDH3A1P30838 453 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 CCR10P46092 362 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 FOXK2Q01167 660 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 RPA4Q13156 261 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 KRT33BQ14525 404 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 SHBQ15464 509 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 TGFBIQ15582 683 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 RPE65Q16518 533 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 PFKFB4Q16877 469 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 HLA-BQ31612 363 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 UAP1L1Q3KQV9 507 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 CCDC153Q494R4 210 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 PEAR1Q5VY43 1037 aaPredicted RBP10.38□□□□□ -0.75
SOX6-213ENST00000530378 PPFIBP2Q8ND30 876 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 STAG3L4Q8TBR4 150 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ATOH1Q92858 354 aaPredicted RBP10.38□□□□□ -0.75
SOX6-213ENST00000530378 FERD3LQ96RJ6 166 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ELF4Q99607 663 aaPredicted RBP10.38□□□□□ -0.75
SOX6-213ENST00000530378 GAREM1Q9H706 876 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ARL15Q9NXU5 204 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 COPG2Q9UBF2 871 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ACSL5Q9ULC5 683 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ASB1Q9Y576 335 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 ASXL3Q9C0F0 2248 aa10.38□□□□□ -0.75
SOX6-213ENST00000530378 PABPN1LA6NDY0 278 aaKnown RBP10.37□□□□□ -0.75
SOX6-213ENST00000530378 TARM1B6A8C7 271 aa10.37□□□□□ -0.75
SOX6-213ENST00000530378 EIF3FO00303 357 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms