RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 RBM41Q96IZ5 413 aaKnown RBP18.31■□□□□ 0.52
SSRP1-204ENST00000529002 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
SSRP1-204ENST00000529002 AGAP4Q96P64 663 aa18.31■□□□□ 0.52
SSRP1-204ENST00000529002 RNF157Q96PX1 679 aa18.31■□□□□ 0.52
SSRP1-204ENST00000529002 ACTR10Q9NZ32 417 aa18.31■□□□□ 0.52
SSRP1-204ENST00000529002 NCOA6Q14686 2063 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-204ENST00000529002 MATN2O00339 956 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 SOCS6O14544 535 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 KLHL18O94889 574 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 CYP1A2P05177 515 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 PTGER4P35408 488 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 TDGF1P3P51864 188 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 PRKG2Q13237 762 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 PRKD1Q15139 912 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-204ENST00000529002 ZNF630Q2M218 657 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-204ENST00000529002 NKAIN1Q4KMZ8 207 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 SHISA6Q6ZSJ9 500 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 C19orf47Q8N9M1 422 aaKnown RBP18.3■□□□□ 0.52
SSRP1-204ENST00000529002 POM121Q96HA1 1249 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 MAGEB10Q96LZ2 347 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-204ENST00000529002 TAAR6Q96RI8 345 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 C17orf62Q9BQA9 187 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 SH3BGRL2Q9UJC5 107 aa18.3■□□□□ 0.52
SSRP1-204ENST00000529002 TRGV8A0A0C4DH27 118 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 MAP3K7O43318 606 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 ITGAXP20702 1163 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 KDELR1P24390 212 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 CD68P34810 354 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-204ENST00000529002 WNT3AP56704 352 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 Q0VFX4 171 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 ITGA9Q13797 1035 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 TLR1Q15399 786 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 B3GNTL1Q67FW5 361 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-204ENST00000529002 ZNF324BQ6AW86 544 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-204ENST00000529002 KDELC1Q6UW63 502 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 BNC2Q6ZN30 1099 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-204ENST00000529002 GLT6D1Q7Z4J2 308 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 BCORP1Q8N888 145 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 OR1N1Q8NGS0 311 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 ZNF398Q8TD17 642 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 DTX3LQ8TDB6 740 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 HGH1Q9BTY7 390 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 AP1M1Q9BXS5 423 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 CDC23Q9UJX2 597 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 AP1M2Q9Y6Q5 423 aa18.29■□□□□ 0.52
SSRP1-204ENST00000529002 LOC285095A0A1B0GVY8 99 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 C19orf84I3L1E1 186 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 PCDH17O14917 1159 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 ZSCAN9O15535 394 aaPredicted RBP18.28■□□□□ 0.52
SSRP1-204ENST00000529002 PDHA2P29803 388 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 SLC14A2Q15849 920 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 SPESP1Q6UW49 350 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 KIRREL2Q6UWL6 708 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 MAP7D3Q8IWC1 876 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 PROKR1Q8TCW9 393 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 THOC3Q96J01 351 aaKnown RBP18.28■□□□□ 0.52
SSRP1-204ENST00000529002 SRPK1Q96SB4 655 aaKnown RBP18.28■□□□□ 0.52
SSRP1-204ENST00000529002 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
SSRP1-204ENST00000529002 TXLNGQ9NUQ3 528 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 IRAK4Q9NWZ3 460 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 HS3ST3B1Q9Y662 390 aa18.28■□□□□ 0.52
SSRP1-204ENST00000529002 A0A0A6YYK5 440 aaPredicted RBP18.27■□□□□ 0.52
SSRP1-204ENST00000529002 C2orf74A8MZ97 194 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 CCL21O00585 134 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 PRAMEF1O95521 474 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 UGT2B7P16662 529 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 MMP11P24347 488 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 PTPN3P26045 913 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 CDSNQ15517 529 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 BCL7AQ4VC05 210 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 TEX44Q53QW1 395 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 GFRALQ6UXV0 394 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 AMIGO1Q86WK6 493 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 FAM20CQ8IXL6 584 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.27■□□□□ 0.52
SSRP1-204ENST00000529002 MRGPRX2Q96LB1 330 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 OLFM3Q96PB7 478 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 OR52A5Q9H2C5 316 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 TRABDQ9H4I3 376 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 TFB2MQ9H5Q4 396 aaKnown RBP18.27■□□□□ 0.52
SSRP1-204ENST00000529002 EPS8L2Q9H6S3 715 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 SMOXQ9NWM0 555 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 SPHK1Q9NYA1 384 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 PLA2G3Q9NZ20 509 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 ICKQ9UPZ9 632 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 HEBP2Q9Y5Z4 205 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 ARL5AQ9Y689 179 aa18.27■□□□□ 0.52
SSRP1-204ENST00000529002 A0A087X0T9 212 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 LRRD1A4D1F6 860 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 PRICKLE3O43900 615 aaPredicted RBP18.26■□□□□ 0.51
SSRP1-204ENST00000529002 WISP2O76076 250 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 PROSCO94903 275 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 FAM228BP0C875 321 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 NFKB1P19838 968 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 ALAS2P22557 587 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 VWA2Q5GFL6 755 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 ZDHHC20Q5W0Z9 365 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 ZNF808Q8N4W9 903 aaPredicted RBP18.26■□□□□ 0.51
SSRP1-204ENST00000529002 LINC00615Q96LM1 132 aaPredicted RBP18.26■□□□□ 0.51
SSRP1-204ENST00000529002 TEKT5Q96M29 485 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms