RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 KIAA1191Q96A73 305 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 FAM122AQ96E09 287 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 ZIM3Q96PE6 472 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 MRPL57Q9BQC6 102 aaKnown RBP7.74□□□□□ -1.17
SSBP3-211ENST00000528787 SLC12A9Q9BXP2 914 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 ZMYND15Q9H091 742 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 ABCG4Q9H172 646 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 VPS11Q9H270 941 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 OR52A5Q9H2C5 316 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 EPB41L4BQ9H329 900 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 CENPHQ9H3R5 247 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 INTS7Q9NVH2 962 aaKnown RBP7.74□□□□□ -1.17
SSBP3-211ENST00000528787 FAM86C1Q9NVL1 165 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 MKS1Q9NXB0 559 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 OR6C2Q9NZP2 312 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 AKAP7Q9P0M2 348 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-211ENST00000528787 GULP1Q9UBP9 304 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 TBC1D29Q9UFV1 150 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 TBK1Q9UHD2 729 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 CDV3Q9UKY7 258 aaKnown RBP7.74□□□□□ -1.17
SSBP3-211ENST00000528787 RNF112Q9ULX5 631 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 PADI4Q9UM07 663 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 PCDHGA1Q9Y5H4 931 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 TNPO3Q9Y5L0 923 aaKnown RBP7.74□□□□□ -1.17
SSBP3-211ENST00000528787 PRSS21Q9Y6M0 314 aa7.74□□□□□ -1.17
SSBP3-211ENST00000528787 OTOGLQ3ZCN5 2332 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 GOLGA4Q13439 2230 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 BPTFQ12830 3046 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 EME2A4GXA9 379 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 A6NCN8 305 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 IQCF5A8MTL0 148 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 BTN3A1O00481 513 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 TOX3O15405 576 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 KERAO60938 352 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SDC3O75056 442 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 H2AFYO75367 372 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ZWINTO95229 277 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SLC35E2BP0CK96 405 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 AMD1P17707 334 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ITGB6P18564 788 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 KRT4P19013 534 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ACP1P24666 158 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 AK4P27144 223 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ACADLP28330 430 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 HPDP32754 393 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CRHR1P34998 444 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SLCO1A2P46721 670 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 RAB28P51157 221 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SLC18A1P54219 525 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CDKN2DP55273 166 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 BNC1Q01954 994 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ZNF844Q08AG5 666 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 BNIP3Q12983 259 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 C1orf61Q13536 156 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CSHL1Q14406 222 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 KIR2DS3Q14952 304 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 EFTUD2Q15029 972 aaKnown RBP eCLIP7.73□□□□□ -1.174e-7■■■■□ 23.6
SSBP3-211ENST00000528787 SF3A2Q15428 464 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SMAD1Q15797 465 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 RPE65Q16518 533 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ZNF658BQ4V348 819 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ZNF789Q5FWF6 425 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 TPRG1LQ5T0D9 272 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 RBM20Q5T481 1227 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 AGBL2Q5U5Z8 902 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ANKS6Q68DC2 871 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SULT1C3Q6IMI6 304 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 TMEM26Q6ZUK4 368 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 MICALCLQ6ZW33 695 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 GLRX5Q86SX6 157 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 C17orf82Q86X59 251 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 NRROSQ86YC3 692 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 GPSM1Q86YR5 675 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 PLXDC1Q8IUK5 500 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 TRIM42Q8IWZ5 723 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CPNE9Q8IYJ1 553 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SLC25A45Q8N413 288 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ARL14Q8N4G2 192 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ARFGAP2Q8N6H7 521 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 EID2Q8N6I1 236 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CFAP61Q8NHU2 1237 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 EPS8L3Q8TE67 593 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 EEF1AKMT1Q8WVE0 214 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 LCN9Q8WX39 176 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ZDHHC12Q96GR4 267 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SCYL1Q96KG9 808 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CNDP2Q96KP4 475 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 APOLD1Q96LR9 279 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 CD180Q99467 661 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 MIPEPQ99797 713 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 RTKNQ9BST9 563 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 HAUS8Q9BT25 410 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 RAB33BQ9H082 229 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 MRPL46Q9H2W6 279 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SRMSQ9H3Y6 488 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SLC40A1Q9NP59 571 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 PRDM8Q9NQV8 689 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 ARL15Q9NXU5 204 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 NKIRAS1Q9NYS0 192 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms