RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SENP1Q9P0U3 644 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ADAMTS6Q9UKP5 1117 aa11.87□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NPEPPSL1A6NEC2 478 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GFYI3L273 518 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 BTN3A1O00481 513 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CDX4O14627 284 aaPredicted RBP11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 FFAR2O15552 330 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ANXA6P08133 673 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 F3P13726 295 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TFEBP19484 476 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CRHR1P34998 444 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 KCNC1P48547 511 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CCT8P50990 548 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ATP6V0D1P61421 351 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 OR4D1Q15615 310 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TSNQ15631 228 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 RPE65Q16518 533 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 FAM83EQ2M2I3 478 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LRRC8EQ6NSJ5 796 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 C16orf46Q6P387 395 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 IYDQ6PHW0 289 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LVRNQ6Q4G3 990 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ISCA2Q86U28 154 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NAGSQ8N159 534 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PHC3Q8NDX5 983 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TFGQ92734 400 aaPredicted RBP11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 C12orf66Q96MD2 445 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SMC6Q96SB8 1091 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CAPS2Q9BXY5 557 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 C12orf65Q9H3J6 166 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NMRAL1Q9HBL8 299 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TMEM216Q9P0N5 145 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ZNF624Q9P2J8 865 aaPredicted RBP11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DOLKQ9UPQ8 538 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ACTL7BQ9Y614 415 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CABIN1Q9Y6J0 2220 aa11.86□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ARHGEF17Q96PE2 2063 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PRAMEF33A0A0G2JMD5 474 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 B4DGG1 531 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 IFRD1O00458 451 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 COPEO14579 308 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 YKT6O15498 198 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TYROBPO43914 113 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PSIP1O75475 530 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GSTA1P08263 222 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NR1D1P20393 614 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SLC19A1P41440 591 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 HALP42357 657 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ATXN3P54252 364 aaPredicted RBP11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SBSNQ6UWP8 590 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 OR5AR1Q8NGP9 310 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ZDHHC1Q8WTX9 485 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 KIAA1191Q96A73 305 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 APOPT1Q96IL0 206 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TFB2MQ9H5Q4 396 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ALG9Q9H6U8 611 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 IMP3Q9NV31 184 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DCDC2Q9UHG0 476 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 EMCNQ9ULC0 261 aa11.85□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 KRT87PA6NCN2 255 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NEMP2A6NFY4 417 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ARHGEF33A8MVX0 844 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PCDHGA12O60330 932 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 NOBOXO60393 691 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 GLRA3O75311 464 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 C1orf105O95561 183 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MTHFD1P11586 935 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 BDKRB1P46663 353 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CCT5P48643 541 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 MPP2Q14168 576 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ACAP2Q15057 778 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PHKG1Q16816 387 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PPP1R3AQ16821 1122 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 CCSMST1Q4G0I0 132 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TECRLQ5HYJ1 363 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 N4BP2L1Q5TBK1 243 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 OGFOD3Q6PK18 319 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 UNC5DQ6UXZ4 953 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 LCA5Q86VQ0 697 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TMEM151AQ8N4L1 468 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SLC37A2Q8TED4 501 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ALKBH8Q96BT7 664 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 TSNARE1Q96NA8 513 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 FOPNLQ96NB1 174 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 EDEM2Q9BV94 578 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SLC12A9Q9BXP2 914 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SSU72Q9NP77 194 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 DNAAF2Q9NVR5 837 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 SIRPGQ9P1W8 387 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 PDE10AQ9Y233 779 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ASF1AQ9Y294 204 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 ASCC3Q8N3C0 2202 aaKnown RBP11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 KIR2DS5A0A0G2JLQ3 304 aa11.84□□□□□ -0.51
TRAF3IP2-211ENST00000528599 A0A0G2JNG1 304 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms