RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SERPINB12Q96P63 405 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 BBC3Q96PG8 261 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 NAPGQ99747 312 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TWSG1Q9GZX9 223 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 SYTL2Q9HCH5 934 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 RNF14Q9UBS8 474 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 RARRES3Q9UL19 164 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 CDYLQ9Y232 598 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 BTRCQ9Y297 605 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 SAR1BQ9Y6B6 198 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZFHX4Q86UP3 3567 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 LAMA5O15230 3695 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 ITPR1Q14643 2758 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 IQCF5A8MTL0 148 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 C2orf74A8MZ97 194 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 H3BMM5 538 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 BTN3A3O00478 584 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 BTN3A1O00481 513 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 SPAG6O75602 509 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 MT-ND3P03897 115 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 RPN2P04844 631 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ITGB2P05107 769 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 FOLR1P15328 257 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ITGB6P18564 788 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 CDH3P22223 829 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PRDX3P30048 256 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 TERF1P54274 439 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 TUBB4BP68371 445 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 HSPA14Q0VDF9 509 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PRKG2Q13237 762 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 SRSF6Q13247 344 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PTK6Q13882 451 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 TUBB2AQ13885 445 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 DHX34Q14147 1143 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 TMED2Q15363 201 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PPP1R7Q15435 360 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 KCTD19Q17RG1 926 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ANKRD20A4Q4UJ75 823 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 RNASEH2BQ5TBB1 312 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 NEPROQ6NW34 567 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 CASC4Q6P4E1 433 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 C6orf15Q6UXA7 325 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 UNC5DQ6UXZ4 953 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 NAPRTQ6XQN6 538 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 SYDE1Q6ZW31 735 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 RASGRP3Q8IV61 690 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 LMNTD2Q8IXW0 634 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ADGRF3Q8IZF5 1079 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 OTUD6BQ8N6M0 293 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 OR5AR1Q8NGP9 310 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 KIAA1143Q96AT1 154 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 SIGLEC10Q96LC7 697 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 HGH1Q9BTY7 390 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 TUBB2BQ9BVA1 445 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PITPNM3Q9BZ71 974 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ULBP3Q9BZM4 244 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 DDX47Q9H0S4 455 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 LATS2Q9NRM7 1088 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 FGF21Q9NSA1 209 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 KCND1Q9NSA2 647 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 OR6C2Q9NZP2 312 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ICKQ9UPZ9 632 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 MRFAP1Q9Y605 127 aa11.75□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZFYVE26Q68DK2 2539 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 GSAPA4D1B5 854 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 EIF4E1BA6NMX2 242 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 GOLGA8MH3BSY2 632 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 CCDC188H7C350 402 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 DNALI1O14645 258 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 MAP3K7O43318 606 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 USP1O94782 785 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 ESR1P03372 595 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 EBLN1P0CF75 366 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 LIFP15018 202 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 WT1P19544 449 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 PAFAH1B1P43034 410 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 PTGIRP43119 386 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 TUBB3Q13509 450 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 KYNUQ16719 465 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 PLEKHS1Q5SXH7 462 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 KIAA1614Q5VZ46 1190 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCSK4Q6UW60 755 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 UNC5AQ6ZN44 842 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 OTOAQ7RTW8 1153 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 HOOK3Q86VS8 718 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 CILP2Q8IUL8 1156 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 KRT222Q8N1A0 295 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 LKAAEAR1Q8TD35 194 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 LPGAT1Q92604 370 aa11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZNF669Q96BR6 464 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC45A3Q96JT2 553 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms