RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 BIRC7Q96CA5 298 aa15.03■□□□□ -0
USH1C-207ENST00000527720 CCDC115Q96NT0 180 aa15.03■□□□□ -0
USH1C-207ENST00000527720 SLC12A9Q9BXP2 914 aa15.03■□□□□ -0
USH1C-207ENST00000527720 ZDHHC6Q9H6R6 413 aa15.03■□□□□ -0
USH1C-207ENST00000527720 RPF2Q9H7B2 306 aaKnown RBP15.03■□□□□ -0
USH1C-207ENST00000527720 LRTM1Q9HBL6 345 aa15.03■□□□□ -0
USH1C-207ENST00000527720 CD320Q9NPF0 282 aa15.03■□□□□ -0
USH1C-207ENST00000527720 OLAHQ9NV23 265 aa15.03■□□□□ -0
USH1C-207ENST00000527720 DMTF1Q9Y222 760 aa15.03■□□□□ -0
USH1C-207ENST00000527720 RNF103-CHMP3A0A140T963 221 aa15.03■□□□□ -0
USH1C-207ENST00000527720 WASH3PC4AMC7 463 aa15.03■□□□□ -0
USH1C-207ENST00000527720 DLGAP1O14490 977 aa15.03■□□□□ -0
USH1C-207ENST00000527720 ACOX3O15254 700 aa15.03■□□□□ -0
USH1C-207ENST00000527720 NUAK1O60285 661 aa15.03■□□□□ -0
USH1C-207ENST00000527720 RSL1D1O76021 490 aaKnown RBP15.03■□□□□ -0
USH1C-207ENST00000527720 TIMP1P01033 207 aa15.03■□□□□ -0
USH1C-207ENST00000527720 LDLRP01130 860 aa15.03■□□□□ -0
USH1C-207ENST00000527720 CDH1P12830 882 aa15.03■□□□□ -0
USH1C-207ENST00000527720 GJA1P17302 382 aa15.03■□□□□ -0
USH1C-207ENST00000527720 MYF6P23409 242 aa15.03■□□□□ -0
USH1C-207ENST00000527720 CCR7P32248 378 aa15.03■□□□□ -0
USH1C-207ENST00000527720 HNMTP50135 292 aa15.03■□□□□ -0
USH1C-207ENST00000527720 OR4D2P58180 307 aa15.03■□□□□ -0
USH1C-207ENST00000527720 PLOD1Q02809 727 aaPredicted RBP15.03■□□□□ -0
USH1C-207ENST00000527720 SP140Q13342 867 aa15.03■□□□□ -0
USH1C-207ENST00000527720 DPY19L3Q6ZPD9 716 aa15.03■□□□□ -0
USH1C-207ENST00000527720 FAM9CQ8IZT9 166 aa15.03■□□□□ -0
USH1C-207ENST00000527720 RMND5BQ96G75 393 aaPredicted RBP15.03■□□□□ -0
USH1C-207ENST00000527720 PPM1MQ96MI6 270 aa15.03■□□□□ -0
USH1C-207ENST00000527720 CORO1BQ9BR76 489 aa15.03■□□□□ -0
USH1C-207ENST00000527720 DPY30Q9C005 99 aa15.03■□□□□ -0
USH1C-207ENST00000527720 GRIP2Q9C0E4 1043 aa15.03■□□□□ -0
USH1C-207ENST00000527720 RBM38Q9H0Z9 239 aaKnown RBP15.03■□□□□ -0
USH1C-207ENST00000527720 BRD9Q9H8M2 597 aa15.03■□□□□ -0
USH1C-207ENST00000527720 SMOXQ9NWM0 555 aa15.03■□□□□ -0
USH1C-207ENST00000527720 ARL15Q9NXU5 204 aa15.03■□□□□ -0
USH1C-207ENST00000527720 THEGQ9P2T0 379 aa15.03■□□□□ -0
USH1C-207ENST00000527720 OAZ3Q9UMX2 235 aa15.03■□□□□ -0
USH1C-207ENST00000527720 SLC8A2Q9UPR5 921 aa15.03■□□□□ -0
USH1C-207ENST00000527720 FAM149AA5PLN7 773 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 FFAR3O14843 346 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 KPNA5O15131 536 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 SLC16A5O15375 505 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 GPR42O15529 346 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 TPST1O60507 370 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 OR6B1O95007 311 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 CXCL14O95715 111 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 C1SP09871 688 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 ZNF23P17027 643 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 ZNF30P17039 623 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 DGKQP52824 942 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 MERTKQ12866 999 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 DYNC1I2Q13409 638 aaKnown RBP15.02□□□□□ -0.01
USH1C-207ENST00000527720 PLEKHS1Q5SXH7 462 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 NAIF1Q69YI7 327 aaPredicted RBP15.02□□□□□ -0.01
USH1C-207ENST00000527720 RBM44Q6ZP01 1051 aaKnown RBP15.02□□□□□ -0.01
USH1C-207ENST00000527720 SH3GL1Q99961 368 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 BDH2Q9BUT1 245 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 ADI1Q9BV57 179 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 CLMPQ9H6B4 373 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 PARVBQ9HBI1 364 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 C1orf109Q9NX04 203 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 PKD2L2Q9NZM6 624 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 ZNF639Q9UID6 485 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 PDE10AQ9Y233 779 aa15.02□□□□□ -0.01
USH1C-207ENST00000527720 NRG2O14511 850 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 VILLO15195 856 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 SEC22BO75396 215 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 GMNNO75496 209 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 UGT2B4P06133 528 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 PABPC1P11940 636 aaKnown RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 CSF2RAP15509 400 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 GGT1P19440 569 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 LSAMPQ13449 338 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 MAPKAPK3Q16644 382 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 SLC36A3Q495N2 470 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 UBE2R2Q712K3 238 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 RGL4Q8IZJ4 473 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 BPIFB1Q8TDL5 484 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 DIS3LQ8TF46 1054 aaKnown RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 GTF2H4Q92759 462 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 MAGEB10Q96LZ2 347 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 CLK4Q9HAZ1 481 aaKnown RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 TUBA8Q9NY65 449 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 PTTG2Q9NZH5 202 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 B4GALT6Q9UBX8 382 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 NEUROG3Q9Y4Z2 214 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 EME2A4GXA9 379 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 PDLIM1O00151 329 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 BNIP3LO60238 219 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 ANXA6P08133 673 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 HIST1H2AGP0C0S8 130 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 CYP2A6P11509 494 aaPredicted RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 HIST1H2ADP20671 130 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 PRPH2P23942 346 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 EPHA5P54756 1037 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 PTGR1Q14914 329 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 KCTD21Q4G0X4 260 aa15.01□□□□□ -0.01
USH1C-207ENST00000527720 USP39Q53GS9 565 aaKnown RBP15.01□□□□□ -0.01
USH1C-207ENST00000527720 BRAT1Q6PJG6 821 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms