RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 DDOQ99489 341 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 TEX12Q9BXU0 123 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 OSGEPL1Q9H4B0 414 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 CHMP1AQ9HD42 196 aaPredicted RBP3.76□□□□□ -1.81
CD44-219ENST00000525685 POLLQ9UGP5 575 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SWAP70Q9UH65 585 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 SCN9AQ15858 1988 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 ADAMTSL1Q8N6G6 1762 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 MED23Q9ULK4 1368 aa3.76□□□□□ -1.81
CD44-219ENST00000525685 IGHV4OR15-8A0A075B7B6 117 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 IFITM10A6NMD0 228 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 YDJCA8MPS7 323 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 PLPP2O43688 288 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 MYOD1P15172 320 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 GJA1P17302 382 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 KCNA5P22460 613 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 MT3P25713 68 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 APOBEC1P41238 236 aaKnown RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 NRIP1P48552 1158 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 CLDN20P56880 219 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 POU3F1Q03052 451 aaPredicted RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 RELQ04864 619 aaPredicted RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 EEF1A2Q05639 463 aaKnown RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 EPS8Q12929 822 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 STK4Q13043 487 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 GTF2H2Q13888 395 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 MVPQ14764 893 aaKnown RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 CCDC57Q2TAC2 916 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 SOWAHCQ53LP3 525 aaPredicted RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 NSUN5P2Q63ZY6 315 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 GTF2H2CQ6P1K8 395 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 PAPD4Q6PIY7 484 aaKnown RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 CFAP77Q6ZQR2 320 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 CLEC17AQ6ZS10 378 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.75□□□□□ -1.81
CD44-219ENST00000525685 POC1AQ8NBT0 407 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 RDM1Q8NG50 284 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 BBS10Q8TAM1 723 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 THAP6Q8TBB0 222 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 CD101Q93033 1021 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 LMLNQ96KR4 655 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 PCYT2Q99447 389 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 MXD3Q9BW11 206 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 PUS3Q9BZE2 481 aaKnown RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 GAREM1Q9H706 876 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 LRRC4Q9HBW1 653 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 MRPL15Q9P015 296 aaKnown RBP3.75□□□□□ -1.81
CD44-219ENST00000525685 PCDHGA5Q9Y5G8 931 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 ZNF609O15014 1411 aa3.75□□□□□ -1.81
CD44-219ENST00000525685 SCN4AP35499 1836 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TCF20Q9UGU0 1960 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 GLTPD2A6NH11 291 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 AGAP14A8MT82 685 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 FAM90A26D6RGX4 464 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 DVL1O14640 695 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 ZNHIT1O43257 154 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 ECE2O60344 883 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 MITFO75030 526 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 GJB3O75712 270 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 RSL1D1O76021 490 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 BEST1O76090 585 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 DDNO94850 711 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 GH2P01242 217 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 LDHCP07864 332 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 SNRNP70P08621 437 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 KRT19P08727 400 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 CDH1P12830 882 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 UGT1A1P22309 533 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 FMO5P49326 533 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 DVL1P1P54792 670 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 GAS1P54826 345 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 HYAL1Q12794 435 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 ZBTB17Q13105 803 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TOMM20Q15388 145 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 NTRK2Q16620 822 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 SYT16Q17RD7 645 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 SETMARQ53H47 684 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 ASPRV1Q53RT3 343 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 RARS2Q5T160 578 aaKnown RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 C9orf57Q5W0N0 161 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 OR7E24Q6IFN5 339 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TMED8Q6PL24 325 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 PLEKHM3Q6ZWE6 761 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TUBA1AQ71U36 451 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 ATG9AQ7Z3C6 839 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TMPRSS12Q86WS5 348 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 PM20D2Q8IYS1 436 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 ZNF441Q8N8Z8 693 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.74□□□□□ -1.81
CD44-219ENST00000525685 TRPC4APQ8TEL6 797 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 SLC44A1Q8WWI5 657 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TUBA1CQ9BQE3 449 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 NEURL2Q9BR09 285 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 RTN4RQ9BZR6 473 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 ANKRD2Q9GZV1 360 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 VPS33BQ9H267 617 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 DBNDD1Q9H9R9 158 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 TCP11L1Q9NUJ3 509 aa3.74□□□□□ -1.81
CD44-219ENST00000525685 CPSF2Q9P2I0 782 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms