RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 PCDHGB1Q9Y5G3 927 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TEX13CA0A0J9YWL9 993 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 SULT1B1O43704 296 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 IFNA4P05014 189 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 PTPN9P43378 593 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 C7orf61Q8IZ16 206 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 FBXO15Q8NCQ5 510 aaPredicted RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 ADAD1Q96M93 576 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 LGMNQ99538 433 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TM9SF2Q99805 663 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 CORO1BQ9BR76 489 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 MUC13Q9H3R2 512 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 AGO4Q9HCK5 861 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 UBQLN2Q9UHD9 624 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3DA0A087WVF3 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3IA0A087WXS9 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3EA0A087X179 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3KA0A087X1G2 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3FA6NER0 549 aaPredicted RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 WASHC1A8K0Z3 465 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3LB9A6J9 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 H0YJX3 145 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 ABHD2P08910 425 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TACSTD2P09758 323 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3HP0C7X1 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 INSRRP14616 1297 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 IL7RP16871 459 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 MAPK8P45983 427 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 AVPR1BP47901 424 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TPRG1LQ5T0D9 272 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 GPR157Q5UAW9 335 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3GQ6DHY5 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3CQ6IPX1 549 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 WASH2PQ6VEQ5 465 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 CYP4V2Q6ZWL3 525 aaPredicted RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TIGD4Q8IY51 512 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TBC1D3Q8IZP1 549 aaPredicted RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 LIX1Q8N485 282 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 OR14K1Q8NGZ2 314 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 FCGR1BQ92637 280 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 OR2S2Q9NQN1 319 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 FARSBQ9NSD9 589 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 HCN3Q9P1Z3 774 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 AGO1Q9UL18 857 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 EPCAMP16422 314 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 GOT1P17174 413 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 CYP3A5P20815 502 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 GLP1RP43220 463 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 PRPF38BQ5VTL8 546 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 ARL9Q6T311 187 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 DAGLBQ8NCG7 672 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 TMEM185BQ9H7F4 350 aa13.47□□□□□ -0.25
LRRK1-202ENST00000525284 RPL36Q9Y3U8 105 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
LRRK1-202ENST00000525284 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 EIF1AXP47813 144 aaKnown RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 SLC26A5P58743 744 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 DDR1Q08345 913 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 NIPAL4Q0D2K0 466 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 BNIP3Q12983 259 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ASTE1Q2TB18 679 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 FAM156AQ8NDB6 213 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ART4Q93070 314 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 TMEM246Q9BRR3 403 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ERVK-19Q9WJR5 959 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 LRRC72A6NJI9 287 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 HCKP08631 526 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 HDCP19113 662 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 SLC18A2Q05940 514 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 MAMLD1Q13495 774 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 SGCBQ16585 318 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 PGAM4Q8N0Y7 254 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 YIPF7Q8N8F6 280 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ZNF557Q8N988 423 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 TCEAL4Q96EI5 215 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 MAP3K14Q99558 947 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 SMIM30A4D0T7 59 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 C12orf71A8MTZ7 269 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 NUDT7P0C024 238 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 SLC15A1P46059 708 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 KCNC2Q96PR1 638 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 KBTBD4Q9NVX7 518 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 CCDC85CA6NKD9 419 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 CXCR6O00574 342 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 EIF1AYO14602 144 aaKnown RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 PLD2O14939 933 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ATG13O75143 517 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ENTPD6O75354 484 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ASLP04424 464 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 GCNT1Q02742 428 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 DUS1LQ6P1R4 473 aaKnown RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 ZSCAN4Q8NAM6 433 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms