RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ZNF140P52738 457 aaPredicted RBP23.19■■□□□ 1.3
USP47-205ENST00000525257 PRKG2Q13237 762 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 PLEKHN1Q494U1 663 aaPredicted RBP23.19■■□□□ 1.3
USP47-205ENST00000525257 MLIPQ5VWP3 458 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 SARM1Q6SZW1 724 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 BBS12Q6ZW61 710 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 SNX20Q7Z614 316 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 GPR135Q8IZ08 494 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 ADGRF3Q8IZF5 1079 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 IQCKQ8N0W5 287 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 TCTN2Q96GX1 697 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 ACTR10Q9NZ32 417 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 C5AR2Q9P296 337 aa23.19■■□□□ 1.3
USP47-205ENST00000525257 ERRFI1Q9UJM3 462 aaPredicted RBP23.19■■□□□ 1.3
USP47-205ENST00000525257 LDB2O43679 373 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 KLF7O75840 302 aaPredicted RBP23.18■■□□□ 1.3
USP47-205ENST00000525257 CBSLP0DN79 551 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 CBSP35520 551 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 DEFB110Q30KQ9 67 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 C1orf189Q5VU69 101 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 MAMDC2Q7Z304 686 aaPredicted RBP23.18■■□□□ 1.3
USP47-205ENST00000525257 TRIM73Q86UV7 250 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 CISD2Q8N5K1 135 aaKnown RBP23.18■■□□□ 1.3
USP47-205ENST00000525257 HEXDCQ8WVB3 486 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 N4BP2L2Q92802 583 aaPredicted RBP23.18■■□□□ 1.3
USP47-205ENST00000525257 DHRS4Q9BTZ2 278 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 MVB12BQ9H7P6 319 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 ASF1BQ9NVP2 202 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 AAR2Q9Y312 384 aaKnown RBP23.18■■□□□ 1.3
USP47-205ENST00000525257 CCDC88CQ9P219 2028 aa23.18■■□□□ 1.3
USP47-205ENST00000525257 MACROD2A1Z1Q3 448 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 APOC4-APOC2K7ER74 178 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 CLDN1O95832 211 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 APOC2P02655 101 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 MC4RP32245 332 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 CD151P48509 253 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 CDKN1CP49918 316 aaPredicted RBP23.17■■□□□ 1.3
USP47-205ENST00000525257 MSLNQ13421 630 aaPredicted RBP23.17■■□□□ 1.3
USP47-205ENST00000525257 ZNF658BQ4V348 819 aaPredicted RBP23.17■■□□□ 1.3
USP47-205ENST00000525257 CCDC181Q5TID7 509 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 SPESP1Q6UW49 350 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 HOOK3Q86VS8 718 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 VSTM4Q8IW00 320 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 C19orf47Q8N9M1 422 aaKnown RBP23.17■■□□□ 1.3
USP47-205ENST00000525257 KRT35Q92764 455 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 VPS37BQ9H9H4 285 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 FAM60AQ9NP50 221 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 ZDHHC3Q9NYG2 299 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 GPN3Q9UHW5 284 aaPredicted RBP23.17■■□□□ 1.3
USP47-205ENST00000525257 B3GNT3Q9Y2A9 372 aa23.17■■□□□ 1.3
USP47-205ENST00000525257 PTRH2Q9Y3E5 179 aaKnown RBP23.17■■□□□ 1.3
USP47-205ENST00000525257 OR2B3O76000 313 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 PRSS56P0CW18 603 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 HADHAP40939 763 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 HADHBP55084 474 aaKnown RBP23.16■■□□□ 1.3
USP47-205ENST00000525257 BOP1Q14137 746 aaKnown RBP23.16■■□□□ 1.3
USP47-205ENST00000525257 PRPSAP1Q14558 356 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 ANKRD20A2Q5SQ80 823 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 ANKRD20A1Q5TYW2 823 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 ANKRD20A3Q5VUR7 823 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 ZNF449Q6P9G9 518 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 CLEC1AQ8NC01 280 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 TFGQ92734 400 aaPredicted RBP23.16■■□□□ 1.3
USP47-205ENST00000525257 FER1L6-AS2Q96M78 137 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 IP6K3Q96PC2 410 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 C17orf62Q9BQA9 187 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 ICKQ9UPZ9 632 aa23.16■■□□□ 1.3
USP47-205ENST00000525257 LRBAP50851 2863 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 IGLV3-16A0A075B6K0 115 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 HCRTR1O43613 425 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 CBX6O95503 412 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 LDLRP01130 860 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 FOLR3P41439 243 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 OTUD4Q01804 1114 aaKnown RBP23.15■■□□□ 1.3
USP47-205ENST00000525257 SPARCL1Q14515 664 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 SSPNQ14714 243 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 SLC9A5Q14940 896 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 GPR33Q49SQ1 333 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 ZRANB3Q5FWF4 1079 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 DCAF10Q5QP82 559 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 LYPLAL1Q5VWZ2 237 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 SERPINA9Q86WD7 417 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 GALNT16Q8N428 558 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 CLDN19Q8N6F1 224 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 ACTL9Q8TC94 416 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 DNAJC1Q96KC8 554 aaKnown RBP23.15■■□□□ 1.3
USP47-205ENST00000525257 FAM118BQ9BPY3 351 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 TBL1YQ9BQ87 522 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 FERMT1Q9BQL6 677 aa23.15■■□□□ 1.3
USP47-205ENST00000525257 SPRTNQ9H040 489 aaPredicted RBP23.15■■□□□ 1.3
USP47-205ENST00000525257 ILKAPQ9H0C8 392 aaPredicted RBP23.15■■□□□ 1.3
USP47-205ENST00000525257 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.15■■□□□ 1.3
USP47-205ENST00000525257 MASP2O00187 686 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 PEX12O00623 359 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 KCNN4O15554 427 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 ALPPP05187 535 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 UGT2B7P16662 529 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 ACRV1P26436 265 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 DCTP40126 519 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 FOXL2P58012 376 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms