RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 HIST1H2AJQ99878 128 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 TEX101Q9BY14 249 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 FRMD8Q9BZ67 464 aaPredicted RBP6.85□□□□□ -1.31
CASP4-205ENST00000525116 VPS16Q9H269 839 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 LRRC19Q9H756 370 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 CNTD2Q9H8S5 307 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 APMAPQ9HDC9 416 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 NLRC4Q9NPP4 1024 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 SEPT11Q9NVA2 429 aaKnown RBP6.85□□□□□ -1.31
CASP4-205ENST00000525116 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
CASP4-205ENST00000525116 KCMF1Q9P0J7 381 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 CD84Q9UIB8 345 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 ZFP69BQ9UJL9 534 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 TP53TG5Q9Y2B4 290 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 CENPEQ02224 2701 aa6.85□□□□□ -1.31
CASP4-205ENST00000525116 USP9XQ93008 2570 aaPredicted RBP6.85□□□□□ -1.31
CASP4-205ENST00000525116 NBASA2RRP1 2371 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 PRRC2CQ9Y520 2896 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 SIGLEC16A6NMB1 481 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 EEF2KO00418 725 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 STK17BO94768 372 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 AGFG2O95081 481 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 EML2O95834 649 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 CTPS1P17812 591 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 CD53P19397 219 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 TNFAIP3P21580 790 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 UQCRFS1P47985 274 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 SLC16A1P53985 500 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 ITGA1P56199 1179 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 POLR2FP61218 127 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 RPL7AP62424 266 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 CDK3Q00526 305 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 MC2RQ01718 297 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 PEX6Q13608 980 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 ERV3-1Q14264 604 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 ICE2Q659A1 982 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 DNAJC24Q6P3W2 148 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 CEACAM20Q6UY09 585 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 RFLNAQ6ZTI6 216 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 Q6ZVL8 140 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 TRIM74Q86UV6 250 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 ZNF677Q86XU0 584 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 BMPERQ8N8U9 685 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 MLKLQ8NB16 471 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 OR10G6Q8NH81 332 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 CLIP3Q96DZ5 547 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 MCEEQ96PE7 176 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 TEFMQ96QE5 360 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 EFHD1Q9BUP0 239 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 SPRY4Q9C004 299 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 PITHD1Q9GZP4 211 aaPredicted RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 DHX35Q9H5Z1 703 aaKnown RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 FAM207AQ9NSI2 230 aaPredicted RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 TAB2Q9NYJ8 693 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 PLEKHB1Q9UF11 243 aaPredicted RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 PCSK1NQ9UHG2 260 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 PRSS50Q9UI38 385 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 SLC17A4Q9Y2C5 497 aa6.84□□□□□ -1.31
CASP4-205ENST00000525116 ARHGEF17Q96PE2 2063 aaPredicted RBP6.84□□□□□ -1.31
CASP4-205ENST00000525116 UNC79Q9P2D8 2635 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 A1L4Q6 167 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 LRRC10BA6NIK2 292 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 MKRN2OSH3BPM6 223 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 TRAFD1O14545 582 aaPredicted RBP6.83□□□□□ -1.32
CASP4-205ENST00000525116 POLR1CO15160 346 aaPredicted RBP6.83□□□□□ -1.32
CASP4-205ENST00000525116 INPP4BO15327 924 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 SNX2O60749 519 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 VPS4BO75351 444 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 HEXIM1O94992 359 aaKnown RBP6.83□□□□□ -1.32
CASP4-205ENST00000525116 CALB1P05937 261 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 IVLP07476 585 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 UNGP13051 313 aaPredicted RBP6.83□□□□□ -1.32
CASP4-205ENST00000525116 GNLYP22749 145 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 LHCGRP22888 699 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 F8A1P23610 371 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 DLSTP36957 453 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 GPR1P46091 355 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 COPB1P53618 953 aaKnown RBP6.83□□□□□ -1.32
CASP4-205ENST00000525116 NRG3P56975 720 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 AP1S1P61966 158 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 IL13RA1P78552 427 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 MC1RQ01726 317 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 FOXM1Q08050 763 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 IL10RBQ08334 325 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 NSUN2Q08J23 767 aaKnown RBP eCLIP6.83□□□□□ -1.32
CASP4-205ENST00000525116 SLC10A7Q0GE19 358 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 ABHD18Q0P651 414 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 SYCP1Q15431 976 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 CA9Q16790 459 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 PPP6R3Q5H9R7 873 aaPredicted RBP6.83□□□□□ -1.32
CASP4-205ENST00000525116 DCUN1D2Q6PH85 259 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 TRIM72Q6ZMU5 477 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 ASB18Q6ZVZ8 466 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 TMEM135Q86UB9 458 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 TSPAN33Q86UF1 283 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 GALNT13Q8IUC8 556 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 ARHGAP12Q8IWW6 846 aa6.83□□□□□ -1.32
CASP4-205ENST00000525116 C3orf20Q8ND61 904 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms