RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CDC7O00311 574 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 QSOX1O00391 747 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 BTN3A3O00478 584 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 BTN3A1O00481 513 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CAPN5O15484 640 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 NRP2O60462 931 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 KCNJ13O60928 360 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CSO75390 466 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 RASSF9O75901 435 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 SLCO2B1O94956 709 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 C1orf105O95561 183 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GUCA1CO95843 209 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ITGA2BP08514 1039 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GSTA2P09210 222 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CCL4P13236 92 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 NCF1P14598 390 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC2A4P14672 509 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ITIH1P19827 911 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 SDHBP21912 280 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 FDXRP22570 491 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GCAP28676 217 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PEBP1P30086 187 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PHBP35232 272 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 HSD17B3P37058 310 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GP5P40197 560 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 FASLGP48023 281 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 LSSP48449 732 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 LIMK2P53671 638 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC12A2P55011 1212 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ADARP55265 1226 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 DLG1Q12959 904 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 RPA4Q13156 261 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CBLBQ13191 982 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GRB7Q14451 532 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GBX1Q14549 363 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 C16orf72Q14CZ0 275 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PHKG1Q16816 387 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 C3orf38Q5JPI3 329 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PLEKHS1Q5SXH7 462 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GRTP1Q5TC63 336 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM219BQ5XKK7 198 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 WASH2PQ6VEQ5 465 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CYHR1Q6ZMK1 362 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 KIAA0408Q6ZU52 694 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 RAPH1Q70E73 1250 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 UBE2R2Q712K3 238 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 RAB44Q7Z6P3 723 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC26A11Q86WA9 606 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 LINC01555Q8NAE3 123 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 EPS8L3Q8TE67 593 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 DCAKDQ8WVC6 231 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 KCTD4Q8WVF5 259 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 LCN9Q8WX39 176 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ADAMTS14Q8WXS8 1223 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 KCNJ9Q92806 393 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 INPP5DQ92835 1189 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PMEPA1Q969W9 287 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ESAMQ96AP7 390 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CCDC74BQ96LY2 380 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PAFAH2Q99487 392 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PKP4Q99569 1192 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 MAP3K3Q99759 626 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CPNE1Q99829 537 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CTRCQ99895 268 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 MCMBPQ9BTE3 642 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ACAT2Q9BWD1 397 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 VPS11Q9H270 941 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 TRIT1Q9H3H1 467 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 C12orf65Q9H3J6 166 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 SRMSQ9H3Y6 488 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 RHOJQ9H4E5 214 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 STN1Q9H668 368 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ACSS3Q9H6R3 686 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 KIR3DX1Q9H7L2 352 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GPAMQ9HCL2 828 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 WASH6PQ9NQA3 447 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ACSS2Q9NR19 701 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 POT1Q9NUX5 634 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 EVA1BQ9NVM1 165 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 HRASLS2Q9NWW9 162 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 OCIAD1Q9NX40 245 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 TAS2R13Q9NYV9 303 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CLCA2Q9UQC9 943 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 VPS9D1Q9Y2B5 631 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 COLEC10Q9Y6Z7 277 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 CFAP54Q96N23 3096 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF106Q9H2Y7 1883 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 WDR87Q6ZQQ6 2873 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TP53BP1Q12888 1972 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 IGHV5-51A0A0C4DH38 117 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A1W2PPM1 405 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 OR5K3A6NET4 321 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 LILRA5A6NI73 299 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC9B1P1A6NJY1 282 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 C1QTNF9BB2RNN3 333 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 TRIM49D1C9J1S8 452 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 F8W8V4 182 aa4.46□□□□□ -1.7
CHMP4A-202ENST00000524955 NTN3O00634 580 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms