RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 MSL3P1P0C860 447 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 ST6GAL1P15907 406 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 CDH3P22223 829 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 CXCR5P32302 372 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 CRADDP78560 199 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 DNASE1L3Q13609 305 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 ERV3-1Q14264 604 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 DEFB109BQ30KR1 87 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 ZNF789Q5FWF6 425 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 PRAMEF17Q5VTA0 474 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 LYPLAL1Q5VWZ2 237 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 ZNF449Q6P9G9 518 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 ZNF517Q6ZMY9 492 aaPredicted RBP12□□□□□ -0.49
VEGFA-223ENST00000523125 NLRP9Q7RTR0 991 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 TRIM58Q8NG06 486 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 OR6P1Q8NGX9 317 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 OR8K5Q8NH50 307 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 ELMO1Q92556 727 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 PEX13Q92968 403 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 FAM117AQ9C073 453 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
VEGFA-223ENST00000523125 CHRAC1Q9NRG0 131 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 LATS2Q9NRM7 1088 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 TREX1Q9NSU2 369 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 SOHLH2Q9NX45 425 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 MARCH4Q9P2E8 410 aaPredicted RBP12□□□□□ -0.49
VEGFA-223ENST00000523125 KCND3Q9UK17 655 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 CDYLQ9Y232 598 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 KCNMB2Q9Y691 235 aa12□□□□□ -0.49
VEGFA-223ENST00000523125 KATNA1O75449 491 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 CREG1O75629 220 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 SCRG1O75711 98 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 RECKO95980 971 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 OR56A5P0C7T3 313 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 PVRP15151 417 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 CCR7P32248 378 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 SESN2P58004 480 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-223ENST00000523125 ABRQ12979 859 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 GPS2Q13227 327 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 PCID2Q5JVF3 399 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 TMTC4Q5T4D3 741 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 C4orf22Q6V702 233 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 UNC5AQ6ZN44 842 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 PRICKLE2Q7Z3G6 844 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 LDB1Q86U70 411 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-223ENST00000523125 TMEM135Q86UB9 458 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 TMEM126BQ8IUX1 230 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 VRK3Q8IV63 474 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 TBC1D21Q8IYX1 336 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 PRELID2Q8N945 189 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 PPHLN1Q8NEY8 458 aaKnown RBP11.99□□□□□ -0.49
VEGFA-223ENST00000523125 FLVCR1-AS1Q8TAF5 88 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 APOBEC4Q8WW27 367 aaKnown RBP11.99□□□□□ -0.49
VEGFA-223ENST00000523125 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.99□□□□□ -0.497e-6■■■■■ 27.5
VEGFA-223ENST00000523125 TRAPPC9Q96Q05 1148 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 ACTR10Q9NZ32 417 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 ASF1AQ9Y294 204 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 COL12A1Q99715 3063 aa11.99□□□□□ -0.49
VEGFA-223ENST00000523125 TCRBV7S3A2A0A539 114 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 IQCF5A8MTL0 148 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 C2orf74A8MZ97 194 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 C21orf140B9A014 251 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 CEP104O60308 925 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 CPNE3O75131 537 aaKnown RBP11.98□□□□□ -0.49
VEGFA-223ENST00000523125 GPC4O75487 556 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 NMBRP28336 390 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 NPY2RP49146 381 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 PRAMEP78395 509 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 PLOD1Q02809 727 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-223ENST00000523125 FASTKD1Q53R41 847 aaKnown RBP11.98□□□□□ -0.49
VEGFA-223ENST00000523125 PLEKHS1Q5SXH7 462 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 LCN10Q6JVE6 187 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 SPESP1Q6UW49 350 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 CDHR3Q6ZTQ4 885 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 SLC22A15Q8IZD6 547 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 OR1L3Q8NH93 324 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 OR5K2Q8NHB8 316 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 MAIP1Q8WWC4 291 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 LRFN5Q96NI6 719 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 OR2A14Q96R47 310 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 TTC1Q99614 292 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 CARD6Q9BX69 1037 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 AP1M1Q9BXS5 423 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 GPR87Q9BY21 358 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 KLHL25Q9H0H3 589 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 ACTL8Q9H568 366 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 FAM60AQ9NP50 221 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 CATSPERZQ9NTU4 200 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 SPHK1Q9NYA1 384 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 POLG2Q9UHN1 485 aa11.98□□□□□ -0.49
VEGFA-223ENST00000523125 HEMK1Q9Y5R4 338 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-223ENST00000523125 PCSK5Q92824 1860 aa11.97□□□□□ -0.49
VEGFA-223ENST00000523125 PIPSLA2A3N6 862 aa11.97□□□□□ -0.49
VEGFA-223ENST00000523125 TMEM150CB9EJG8 249 aa11.97□□□□□ -0.49
VEGFA-223ENST00000523125 H3BMH7 237 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms