RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SLC30A1Q9Y6M5 507 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 PTCH1Q13635 1447 aa3.92□□□□□ -1.78
SKP1-209ENST00000522552 FAM157AC9JC47 383 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 LEFTY2O00292 366 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 MATN2O00339 956 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ANKRD28O15084 1053 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 KLK8O60259 260 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 B4GALT2O60909 372 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ZNF217O75362 1048 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ECI2O75521 394 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 RAD51DO75771 328 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 STAG3L3P0CL85 134 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 RALAP11233 206 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ETFAP13804 333 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TAL1P17542 331 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 CD22P20273 847 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ATP6V1C1P21283 382 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TGM2P21980 687 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 RFC2P35250 354 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ASCL1P50553 236 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 HNRNPMP52272 730 aaKnown RBP eCLIP3.91□□□□□ -1.781e-11■■■■□ 25
SKP1-209ENST00000522552 ATP5IP56385 69 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 HUNKP57058 714 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 JAG1P78504 1218 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 NHLH2Q02577 135 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ARHGAP1Q07960 439 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TRDNQ13061 729 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TP53BP2Q13625 1128 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 STXBP2Q15833 593 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ZNF792Q3KQV3 632 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TBC1D25Q3MII6 688 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 METTL11BQ5VVY1 283 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 FIGLAQ6QHK4 219 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 PRSS55Q6UWB4 352 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 TMEM26Q6ZUK4 368 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TRILQ7L0X0 811 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 WDR49Q8IV35 697 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 C16orf71Q8IYS4 520 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 CENPLQ8N0S6 344 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 C12orf76Q8N812 135 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 BOLLQ8N9W6 283 aaKnown RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 KIAA0895Q8NCT3 520 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 FAM71CQ8NEG0 241 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 GJC3Q8NFK1 279 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 OR4N2Q8NGD1 307 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ABHD4Q8TB40 342 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 FEZF2Q8TBJ5 459 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 DQX1Q8TE96 717 aaKnown RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.91□□□□□ -1.787e-9■■■■■ 72.6
SKP1-209ENST00000522552 LPIN2Q92539 896 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 APBB2Q92870 758 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ORAI1Q96D31 301 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 MAGED4Q96JG8 741 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ZNF347Q96SE7 839 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ACOX2Q99424 681 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 SEPHS2Q99611 448 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 GPA33Q99795 319 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 SPAG8Q99932 426 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 SIKE1Q9BRV8 207 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 TMEM79Q9BSE2 394 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 SIRPDQ9H106 197 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 MYNNQ9NPC7 610 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 SIRT5Q9NXA8 310 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 BARHL2Q9NY43 387 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 RNF181Q9P0P0 153 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 STK26Q9P289 416 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 ADAM29Q9UKF5 820 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 KIAA1257Q9ULG3 409 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 FZD4Q9ULV1 537 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 AP4B1Q9Y6B7 739 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 SLC4A4Q9Y6R1 1079 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 V9GYY5 206 aaPredicted RBP3.91□□□□□ -1.78
SKP1-209ENST00000522552 PHLPP2Q6ZVD8 1323 aa3.91□□□□□ -1.78
SKP1-209ENST00000522552 A0A1B0GUL7 405 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 A0A1W2PPQ1 181 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 TMEM8BA6NDV4 472 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 TTC34A8MYJ7 566 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 E9PI62 339 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 VCYO14598 125 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 MAP2K7O14733 419 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CSDE1O75534 798 aaKnown RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 GCATO75600 419 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 ASNSP08243 561 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 ELANEP08246 267 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 HMBSP08397 361 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 PPP3CBP16298 524 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 SRD5A1P18405 259 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 IGFBP6P24592 240 aaPredicted RBP3.9□□□□□ -1.78
SKP1-209ENST00000522552 CTGFP29279 349 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 EPS15P42566 896 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 IER3P46695 156 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 NPBWR1P48145 328 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 PEX5P50542 639 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 ZNF84P51523 738 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CLCN5P51795 746 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CACNA2D1P54289 1103 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 MFAP3P55082 362 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 PRMT2P55345 433 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 CNGA3Q16281 694 aa3.9□□□□□ -1.78
SKP1-209ENST00000522552 C2orf68Q2NKX9 166 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms