RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GATA5Q9BWX5 397 aaPredicted RBP15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 UGT1A7Q9HAW7 530 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 UGT1A10Q9HAW8 530 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 UGT1A8Q9HAW9 530 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 IL23AQ9NPF7 189 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 ARL8BQ9NVJ2 186 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 CFL2Q9Y281 166 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 FAM92AA1XBS5 289 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 CAPN14A8MX76 684 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 PPEF2O14830 753 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 ZNF8P17098 575 aaPredicted RBP15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 CASP9P55211 416 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 RGS21Q2M5E4 152 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 ISLR2Q6UXK2 745 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 FAM81AQ8TBF8 368 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 SLC35F5Q8WV83 523 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 EBF3Q9H4W6 596 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 SIX2Q9NPC8 291 aa15.97■□□□□ 0.15
PCDHA3-201ENST00000522353 TULP2O00295 520 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 TNFRSF11BO00300 401 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 DLDP09622 509 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 CSNK2A2P19784 350 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 CYP4F3Q08477 520 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 MED22Q15528 200 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 SH3PXD2AQ5TCZ1 1133 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 LYSMD3Q7Z3D4 306 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 TDRPQ86YL5 185 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 GSTCDQ8NEC7 633 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 IPCEF1Q8WWN9 437 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 EBPLQ9BY08 206 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 ELAC1Q9H777 363 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 ADAP2Q9NPF8 381 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 THUMPD1Q9NXG2 353 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 STX16-NPEPL1H3BU86 382 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 STX16O14662 325 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 CHST10O43529 356 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 GMFGO60234 142 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 POP7O75817 140 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 PRKCGP05129 697 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 SWT1Q5T5J6 900 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 ZNF366Q8N895 744 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 TRIB2Q92519 343 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 KLHDC7BQ96G42 594 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 NMUR2Q9GZQ4 415 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 USP29Q9HBJ7 922 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 RASSF1Q9NS23 344 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 COMMD9Q9P000 198 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 IFT80Q9P2H3 777 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 LGALS13Q9UHV8 139 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 SNX7Q9UNH6 387 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 U3KQV3 271 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 KMOO15229 486 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 SERPINA1P01009 418 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 CSF2RAP15509 400 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 FASTKD3Q14CZ7 662 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 SLC9B2Q86UD5 537 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 OR2T34Q8NGX1 318 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 OR2T3Q8NH03 318 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 RALGPS2Q86X27 583 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 CMTR2Q8IYT2 770 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 TWNKQ96RR1 684 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 TTYH3Q9C0H2 523 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 SERINC1Q9NRX5 453 aa15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 PDP1Q9P0J1 537 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-201ENST00000522353 KLHL18O94889 574 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 PGM3O95394 542 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 ALPIP09923 528 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 CHRNA6Q15825 494 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 ARMCX6Q7L4S7 300 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 PGAM4Q8N0Y7 254 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 NECTIN4Q96NY8 510 aa15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 DNAAF2Q9NVR5 837 aaKnown RBP15.96■□□□□ 0.14
PCDHA3-201ENST00000522353 MNDAP41218 407 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SERINC3Q13530 473 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 HKDC1Q2TB90 917 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF311Q5JNZ3 666 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC34A3Q8N130 599 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 ART5Q96L15 291 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 TRNT1Q96Q11 434 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 GNEQ9Y223 722 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 GSC2O15499 205 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 REM1O75628 298 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 ATP1B2P14415 290 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 PRDX6P30041 224 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 CRISP3P54108 245 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 LIPEQ05469 1076 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 CAMK1Q14012 370 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SLBPQ14493 270 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 MS4A13Q5J8X5 152 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 OSTM1Q86WC4 334 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 RGMAQ96B86 450 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 HBEGFQ99075 208 aa15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 MTERF1Q99551 399 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-201ENST00000522353 P2RY13Q9BPV8 354 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms