RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 FGF5P12034 268 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 NELFEP18615 380 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 RBL1P28749 1068 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 ADRA1AP35348 466 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 HALP42357 657 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 TNNT3P45378 269 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 MSLNQ13421 630 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 NFE2L1Q14494 772 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 PTPRCAPQ14761 206 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 DEFB109BQ30KR1 87 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 ATP1A1-AS1Q5TC04 95 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 METRNLQ641Q3 311 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 C11orf63Q6NUN7 778 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 C6orf15Q6UXA7 325 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 RANBP10Q6VN20 620 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 FAM92BQ6ZTR7 304 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 GLT6D1Q7Z4J2 308 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 PTRH1Q86Y79 214 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 CCDC170Q8IYT3 715 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 CELF2-AS1Q8N7Q2 184 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 GPR150Q8NGU9 434 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 ZNF398Q8TD17 642 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 APOBEC4Q8WW27 367 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 STARD8Q92502 1023 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 RNF31Q96EP0 1072 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 RBM41Q96IZ5 413 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 SLC41A2Q96JW4 573 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 TTC25Q96NG3 672 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 OR6C1Q96RD1 312 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 ULBP3Q9BZM4 244 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 ASH1LQ9NR48 2969 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 RSPH14Q9UHP6 348 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 ZKSCAN5Q9Y2L8 839 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 PKP3Q9Y446 797 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 MRPS18BQ9Y676 258 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 SCN8AQ9UQD0 1980 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 SDK2Q58EX2 2172 aa9.06□□□□□ -0.96
CTNNA1-221ENST00000520339 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 IGHV5-51A0A0C4DH38 117 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 MEGF11A6BM72 1044 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 MGAT4DA6NG13 374 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 SLC22A31A6NKX4 558 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 H7C0C1 242 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 APOC4-APOC2K7ER74 178 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 TMPRSS2O15393 492 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 SGTAO43765 313 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 RASSF9O75901 435 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 ANXA9O76027 345 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 KIAA0754O94854 1291 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 NDUFA10O95299 355 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 APOC2P02655 101 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 FOLR1P15328 257 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 TCN2P20062 427 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 MSNP26038 577 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 DLSTP36957 453 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 ATP5OP48047 213 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 GEMP55040 296 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 PPP1CAP62136 330 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 XIAPP98170 497 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 ITGA9Q13797 1035 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 TAF1AQ15573 450 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 IRGCQ6NXR0 463 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 RASGRP3Q8IV61 690 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 ELMO2Q96JJ3 720 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 ZNF514Q96K75 400 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 FICDQ9BVA6 458 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 WNT10AQ9GZT5 417 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 MRPL18Q9H0U6 180 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 GBA3Q9H227 469 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 CRIM1Q9NZV1 1036 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 CROTQ9UKG9 612 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 KCTD3Q9Y597 815 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 ARL5AQ9Y689 179 aa9.05□□□□□ -0.96
CTNNA1-221ENST00000520339 TLDC2A0PJX2 215 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 C5orf60A6NFR6 353 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 OR2AG2A6NM03 316 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 C2orf81A6NN90 581 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 AGAP14A8MT82 685 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 CLGNO14967 610 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 ARHGAP6O43182 974 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 NRDCO43847 1150 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 DNAJA2O60884 412 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 SRP72O76094 671 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 TIAF1O95411 115 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 PRAMEF1O95521 474 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 MTHFD1P11586 935 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 DRD2P14416 443 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 MSH3P20585 1137 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 CTNNA1P35221 906 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 PTPN7P35236 360 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 OTUD4Q01804 1114 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 TLE1Q04724 770 aa9.04□□□□□ -0.96
CTNNA1-221ENST00000520339 SPA17Q15506 151 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms