RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 UCKL1Q9NWZ5 548 aa13.81□□□□□ -0.2
SDC2-203ENST00000519587 ASF1AQ9Y294 204 aa13.81□□□□□ -0.2
SDC2-203ENST00000519587 ST14Q9Y5Y6 855 aa13.81□□□□□ -0.2
SDC2-203ENST00000519587 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
SDC2-203ENST00000519587 COLEC10Q9Y6Z7 277 aa13.81□□□□□ -0.2
SDC2-203ENST00000519587 A0A1W2PPM1 405 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 GOLGA8RI6L899 631 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 SLC16A5O15375 505 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 FLRT2O43155 660 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 SASH3O75995 380 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 MATN4O95460 622 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 TSPAN12O95859 305 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 ENO2P09104 434 aaPredicted RBP13.8□□□□□ -0.2
SDC2-203ENST00000519587 ACADLP28330 430 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 GRK6P43250 576 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 CCT5P48643 541 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 RPIAP49247 311 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 PGGT1BP53609 377 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 ABRQ12979 859 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 SLC14A1Q13336 389 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 RPE65Q16518 533 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 PPM1JQ5JR12 505 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 TMEM207Q6UWW9 146 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 XKR5Q6UX68 686 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 FRA10AC1Q70Z53 315 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 KANSL1Q7Z3B3 1105 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 SLC9B2Q86UD5 537 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 GATAD2AQ86YP4 633 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 DCUN1D3Q8IWE4 304 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 RBM12BQ8IXT5 1001 aaKnown RBP13.8□□□□□ -0.2
SDC2-203ENST00000519587 CENPLQ8N0S6 344 aaPredicted RBP13.8□□□□□ -0.2
SDC2-203ENST00000519587 SLC25A45Q8N413 288 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 SFRP1Q8N474 314 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 RAB42Q8N4Z0 105 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 ARL10Q8N8L6 244 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 OR2I1PQ8NGU4 316 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 CFAP61Q8NHU2 1237 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 ANKRD49Q8WVL7 239 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 TRIM54Q9BYV2 358 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 POT1Q9NUX5 634 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 MKS1Q9NXB0 559 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 SIRPGQ9P1W8 387 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 DCDC2Q9UHG0 476 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 POLG2Q9UHN1 485 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 WDR37Q9Y2I8 494 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 CFAP47Q6ZTR5 3102 aa13.8□□□□□ -0.2
SDC2-203ENST00000519587 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 NPEPPSL1A6NEC2 478 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 SYCE1LA8MT33 242 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 HMGB1P1B2RPK0 211 aaPredicted RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 AGPSO00116 658 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 ZBTB14O43829 449 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 VIPP01282 170 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 S100BP04271 92 aaPredicted RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 RBP1P09455 135 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 BRAFP15056 766 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 TFEBP19484 476 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 SDHBP21912 280 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 IRF9Q00978 393 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 ACAP2Q15057 778 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 C14orf28Q4W4Y0 310 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 UBE2R2Q712K3 238 aaPredicted RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 CLEC14AQ86T13 490 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 TBC1D21Q8IYX1 336 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 KYQ8NBH2 561 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 MCOLN3Q8TDD5 553 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 ZFPM2Q8WW38 1151 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 ASB11Q8WXH4 323 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 KIAA1191Q96A73 305 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 SH3KBP1Q96B97 665 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 SCYL1Q96KG9 808 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 ATP6V1G3Q96LB4 118 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 INSM2Q96T92 566 aaPredicted RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 RAB11FIP5Q9BXF6 653 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 TFB2MQ9H5Q4 396 aaKnown RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 PARD6AQ9NPB6 346 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 IGSF5Q9NSI5 407 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 RNF112Q9ULX5 631 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 NOVA2Q9UNW9 492 aaKnown RBP13.79□□□□□ -0.2
SDC2-203ENST00000519587 CHD8Q9HCK8 2581 aa13.79□□□□□ -0.2
SDC2-203ENST00000519587 COL5A1P20908 1838 aaPredicted RBP13.78□□□□□ -0.2
SDC2-203ENST00000519587 OR52A4PA6NMU1 304 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 PSIP1O75475 530 aaKnown RBP13.78□□□□□ -0.2
SDC2-203ENST00000519587 EML2O95834 649 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
SDC2-203ENST00000519587 CD1DP15813 335 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 XRCC1P18887 633 aaPredicted RBP13.78□□□□□ -0.2
SDC2-203ENST00000519587 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 CRHR1P34998 444 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 AP1S2P56377 157 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 CLCA4Q14CN2 919 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 NR0B2Q15466 257 aa13.78□□□□□ -0.2
SDC2-203ENST00000519587 TSNQ15631 228 aaKnown RBP13.78□□□□□ -0.2
SDC2-203ENST00000519587 TNFAIP8L3Q5GJ75 292 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms