RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 INPP5DQ92835 1189 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 STAMBPL1Q96FJ0 436 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 CELF6Q96J87 481 aaKnown RBP5.89□□□□□ -1.47
PABPC1-207ENST00000518716 SLC41A2Q96JW4 573 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 PLEKHG4BQ96PX9 1271 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 FERD3LQ96RJ6 166 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-207ENST00000518716 SLC29A3Q9BZD2 475 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 PIF1Q9H611 641 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 CATSPERBQ9H7T0 1116 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 NOD2Q9HC29 1040 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 LUZP4Q9P127 313 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 VPS18Q9P253 973 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 ZNF624Q9P2J8 865 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-207ENST00000518716 EPHA6Q9UF33 1036 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 KLHL3Q9UH77 587 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 PPT2Q9UMR5 302 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 PHTF1Q9UMS5 762 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 ANKRD12Q6UB98 2062 aa5.89□□□□□ -1.47
PABPC1-207ENST00000518716 DCHS2Q6V1P9 2916 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ARGFXA6NJG6 315 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 SIGLEC16A6NMB1 481 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MATN3O15232 486 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 LRCH4O75427 683 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 E2F6O75461 281 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 PGLSO95336 258 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 CAPN1P07384 714 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 KRT3P12035 628 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 FOLR1P15328 257 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ITGA3P26006 1051 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 CASP14P31944 242 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 GNALP38405 381 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 GPR1P46091 355 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ZNF143P52747 638 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 STC1P52823 247 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MIIPQ5JXC2 388 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 LCN10Q6JVE6 187 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 FAM199XQ6PEV8 388 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 DOK6Q6PKX4 331 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 CYP4V2Q6ZWL3 525 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MARK2Q7KZI7 788 aaKnown RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 PPP1R3BQ86XI6 285 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ZNF677Q86XU0 584 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ZNF354CQ86Y25 554 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 GALNT13Q8IUC8 556 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 RASGRP3Q8IV61 690 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MCEMP1Q8IX19 187 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 RHOT1Q8IXI2 618 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 CISD2Q8N5K1 135 aaKnown RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 LZTR1Q8N653 840 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ZBTB2Q8N680 514 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 AOPEPQ8N6M6 819 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ARFGAP1Q8N6T3 406 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 EXD1Q8NHP7 514 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 SLC20A1Q8WUM9 679 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 AP2M1Q96CW1 435 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MOCOSQ96EN8 888 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MRFAP1L1Q96HT8 127 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 LRFN5Q96NI6 719 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ZNF599Q96NL3 588 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 SMIM14Q96QK8 99 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 NUDCD1Q96RS6 583 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 PCDHB18PQ96TA0 734 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 MGME1Q9BQP7 344 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 STK33Q9BYT3 514 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 IQCGQ9H095 443 aaKnown RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 RMI1Q9H9A7 625 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 SLC40A1Q9NP59 571 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 SLAMF7Q9NQ25 335 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 ACSS2Q9NR19 701 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 GPATCH2Q9NW75 528 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 C5AR2Q9P296 337 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 PCSK1NQ9UHG2 260 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 RWDD2AQ9UIY3 292 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 FARSAQ9Y285 508 aaKnown RBP5.88□□□□□ -1.47
PABPC1-207ENST00000518716 NTNG1Q9Y2I2 539 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 PCDHB14Q9Y5E9 798 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 CORINQ9Y5Q5 1042 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 FHOD1Q9Y613 1164 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 DOCK10Q96BY6 2186 aa5.88□□□□□ -1.47
PABPC1-207ENST00000518716 FER1L5A0AVI2 2057 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 NIPBLQ6KC79 2804 aaeCLIP5.87□□□□□ -1.47
PABPC1-207ENST00000518716 FBN3Q75N90 2809 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 IGHV5-51A0A0C4DH38 117 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 HEATR9A2RTY3 570 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 ARHGAP42A6NI28 874 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 TMCO5BA8MYB1 307 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 F8VZ95 297 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 E2F3O00716 465 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 CHUKO15111 745 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 UBXN7O94888 489 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 FGFR1OPO95684 399 aaKnown RBP5.87□□□□□ -1.47
PABPC1-207ENST00000518716 PRLP01236 227 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 PGRP06401 933 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 PYGLP06737 847 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 PDHA1P08559 390 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 RAB40ALP0C0E4 278 aa5.87□□□□□ -1.47
PABPC1-207ENST00000518716 CYP2A6P11509 494 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-207ENST00000518716 BRAFP15056 766 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms