RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 TMEM220Q6QAJ8 160 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 MEX3BQ6ZN04 569 aaKnown RBP9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 FAM83HQ6ZRV2 1179 aaPredicted RBP9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 LCN9Q8WX39 176 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 DLG3Q92796 817 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 HAS2Q92819 552 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 CCM2Q9BSQ5 444 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 WWP1Q9H0M0 922 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 CXXC4Q9H2H0 198 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 SEMA3GQ9NS98 782 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 CHMP5Q9NZZ3 219 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 SH3BGRL2Q9UJC5 107 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 NCOA6Q14686 2063 aaPredicted RBP9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 ANKRD12Q6UB98 2062 aa9.49□□□□□ -0.89
SH2D4A-202ENST00000518040 MGAT4DA6NG13 374 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 H3BMH7 237 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 CNOT3O75175 753 aaKnown RBP9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 HLA-DQB2P05538 268 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 TPM2P07951 284 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 KLK2P20151 261 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 CD86P42081 329 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 KIRREL2Q6UWL6 708 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 EID3Q8N140 333 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 RASGEF1AQ8N9B8 481 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 DDHD1Q8NEL9 900 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 SUN3Q8TAQ9 357 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 HSPH1Q92598 858 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 NINJ1Q92982 152 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 ZNF653Q96CK0 615 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 MAGED4Q96JG8 741 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 MRPS2Q9Y399 296 aaKnown RBP9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 HS3ST3B1Q9Y662 390 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 SCINQ9Y6U3 715 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 CCDC88CQ9P219 2028 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 KLHL18O94889 574 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 ONECUT2O95948 504 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 HPP00738 406 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 SLC4A1P02730 911 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 MX2P20592 715 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 HMGCLP35914 325 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 CTSCP53634 463 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 ARSFP54793 590 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 ITGA9Q13797 1035 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 RBBP7Q16576 425 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 FKBP15Q5T1M5 1219 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 TAOK1Q7L7X3 1001 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 OVCH1Q7RTY7 1134 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 C19orf47Q8N9M1 422 aaKnown RBP9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 OR2L2Q8NH16 312 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 CCDC110Q8TBZ0 833 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 ADAMTS18Q8TE60 1221 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 NANOS1Q8WY41 292 aaKnown RBP9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 SLC26A1Q9H2B4 701 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 TFB2MQ9H5Q4 396 aaKnown RBP9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 DHCR7Q9UBM7 475 aaKnown RBP9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 TNFRSF10DQ9UBN6 386 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 MEMO1Q9Y316 297 aa9.48□□□□□ -0.89
SH2D4A-202ENST00000518040 CACNA1CQ13936 2221 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 C17orf113A0A1B0GUU1 675 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 OR2AG2A6NM03 316 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 BTN3A1O00481 513 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 S1PR4O95977 384 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 MMP2P08253 660 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 RARAP10276 462 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 KRT81Q14533 505 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 SLC9A5Q14940 896 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 PAFAH1B3Q15102 231 aaKnown RBP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 SLC14A2Q15849 920 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 C3AR1Q16581 482 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 KRTCAP3Q53RY4 240 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 TCP11X2Q5H9J9 407 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 CCDC183Q5T5S1 534 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 SARM1Q6SZW1 724 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 Q6ZPB1 254 aaPredicted RBP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 KBTBD2Q8IY47 623 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 OR11G2Q8NGC1 345 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 THAP3Q8WTV1 239 aaPredicted RBP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 CA5BP1Q8WTZ4 195 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 PHF10Q8WUB8 498 aaKnown RBP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 TRIB3Q96RU7 358 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 SPRTNQ9H040 489 aaPredicted RBP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 RNF32Q9H0A6 362 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 TRABDQ9H4I3 376 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 PCDH18Q9HCL0 1135 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 MRPL47Q9HD33 250 aaKnown RBP9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 IRAK4Q9NWZ3 460 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 PCDHGB6Q9Y5F9 930 aa9.47□□□□□ -0.89
SH2D4A-202ENST00000518040 BTN3A3O00478 584 aa9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 MFSD11O43934 449 aa9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 ALOX12BO75342 701 aa9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 ZRANB2O95218 330 aaKnown RBP eCLIP9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 MSH3P20585 1137 aa9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 MST1P26927 711 aa9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 IL1R2P27930 398 aa9.46□□□□□ -0.89
SH2D4A-202ENST00000518040 PBLDP30039 288 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms