RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CNIH3Q8TBE1 160 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ADAMTS16Q8TE57 1224 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PSMG2Q969U7 264 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ESAMQ96AP7 390 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PGAP3Q96FM1 320 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TEPSINQ96N21 525 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 UROC1Q96N76 676 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TSSK3Q96PN8 268 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF382Q96SR6 550 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 HBEGFQ99075 208 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SMOQ99835 787 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SH3BP4Q9P0V3 963 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 A0A1W2PQH9 124 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CENPBD1B2RD01 187 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 hCG_2039718K7EN88 272 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TNFRSF11BO00300 401 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CDC7O00311 574 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 B4GAT1O43505 415 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PEX10O60683 326 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MMP3P08254 477 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF24P17028 368 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TALDO1P37837 337 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PTGER3P43115 390 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MAP2K4P45985 399 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RECQLP46063 649 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RPS14P62263 151 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ARHGAP1Q07960 439 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RCAN2Q14206 197 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 SPCS2Q15005 226 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TAF1AQ15573 450 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 KCNJ8Q15842 424 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 HIST2H2ACQ16777 129 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 HIST2H2AA3Q6FI13 130 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 FAM131AQ6UXB0 335 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CERS6Q6ZMG9 384 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PTCHD4Q6ZW05 846 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PLEKHH3Q7Z736 793 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CPNE9Q8IYJ1 553 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RBFAQ8N0V3 343 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ASCC1Q8N9N2 400 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 OR13C4Q8NGS5 318 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ZFP90Q8TF47 636 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 MUL1Q969V5 352 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 CDKN2AIPNLQ96HQ2 116 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 PAWRQ96IZ0 340 aaKnown RBP6.55□□□□□ -1.36
CPNE3-203ENST00000517490 YME1L1Q96TA2 773 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 RERGLQ9H628 205 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF385DQ9H6B1 395 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 BPIFA1Q9NP55 256 aa6.55□□□□□ -1.36
CPNE3-203ENST00000517490 TNFRSF21O75509 655 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CPNE6O95741 557 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MT-ND2P03891 347 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 YES1P07947 543 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 KCNA5P22460 613 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PSMA1P25786 263 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 HSPA7P48741 367 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SLC10A7Q0GE19 358 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ABHD18Q0P651 414 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PPP1R8Q12972 351 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ANXA8L1Q5VT79 327 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ATG9BQ674R7 924 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 NEK5Q6P3R8 708 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PLET1Q6UQ28 207 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 RANBP10Q6VN20 620 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TEX19Q8NA77 164 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ARRDC4Q8NCT1 418 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CHDHQ8NE62 594 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 OR6Q1Q8NGQ2 317 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PHF10Q8WUB8 498 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ANKRD49Q8WVL7 239 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TP53INP1Q96A56 240 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 IMP4Q96G21 291 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PRRG3Q9BZD7 231 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TREX1Q9NSU2 369 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 VPS51Q9UID3 782 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 IFT52Q9Y366 437 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 TRPV2Q9Y5S1 764 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 H3BN98 237 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MAFKO60675 156 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 UPK1BO75841 260 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SULT1C4O75897 302 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CLDN9O95484 217 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ALDOCP09972 364 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PRKAR1AP10644 381 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 GABRB3P28472 473 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 GSTM5P46439 218 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 MAPKAPK2P49137 400 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ADARB1P78563 741 aaKnown RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CNTN1Q12860 1018 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 DUSP28Q4G0W2 176 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 CTXN3Q4LDR2 81 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 PAGE3Q5JUK9 113 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ARMC12Q5T9G4 340 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF57Q68EA5 555 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF517Q6ZMY9 492 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-203ENST00000517490 GALNT7Q86SF2 657 aa6.54□□□□□ -1.36
CPNE3-203ENST00000517490 SYVN1Q86TM6 617 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms