RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 TMEM159Q96B96 161 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SLC35A4Q96G79 324 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FAR2Q96K12 515 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RIPOR3Q96MK2 946 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FAM20AQ96MK3 541 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NECTIN4Q96NY8 510 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 YME1L1Q96TA2 773 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 HNRNPABQ99729 332 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TRIM54Q9BYV2 358 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SLC13A1Q9BZW2 595 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MARCH7Q9H992 704 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TRPC7Q9HCX4 862 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 UBN1Q9NPG3 1134 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 A1CFQ9NQ94 594 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SLC6A13Q9NSD5 602 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MAN2C1Q9NTJ4 1040 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TBC1D23Q9NUY8 699 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TYW1Q9NV66 732 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FBXO28Q9NVF7 368 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 WSB2Q9NYS7 404 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 PLAC8Q9NZF1 115 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 GRHL1Q9NZI5 618 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 WDR35Q9P2L0 1181 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CDC23Q9UJX2 597 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 GGA2Q9UJY4 613 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RAB21Q9UL25 225 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 PCDHA6Q9UN73 950 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 EPB41L3Q9Y2J2 1087 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CYP46A1Q9Y6A2 500 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 PIAS3Q9Y6X2 628 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MTCL1Q9Y4B5 1905 aaKnown RBP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ZNF462Q96JM2 2506 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SF3B1O75533 1304 aaKnown RBP eCLIP-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 IGSF9BQ9UPX0 1349 aa-0.9□□□□□ -2.55
RNU6-1238P-201ENST00000517215 IGKV1-9A0A0C4DH69 117 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM90A18PA6NE21 464 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM90A16PA6NEW6 464 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RPL37AP8A6NKH3 93 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM90A9PA6NNJ1 464 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM90A5PA8MXJ8 464 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TMX2-CTNND1H3BSU7 103 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 HAS3O00219 553 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 BTN3A1O00481 513 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 VILLO15195 856 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NKX2-8O15522 239 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 HOXC11O43248 304 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 INMTO95050 263 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NXPH4O95158 308 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SEC24AO95486 1093 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PIGRP01833 764 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 HSPB1P04792 205 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TFAP2AP05549 437 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CYP21A2P08686 494 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM90A15PP0C7V4 464 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM90A14PP0C7W9 464 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MUC1P15941 1255 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TPH1P17752 444 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 LHCGRP22888 699 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 BDKRB2P30411 391 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TTKP33981 857 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FASLGP48023 281 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NPBWR1P48145 328 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NRIP1P48552 1158 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TRPC1P48995 793 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC25A1P53007 311 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NDUFV3P56181 108 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FOXL2P58012 376 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ERVK-16P61578 105 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NKX6-1P78426 367 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC18A2Q05940 514 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC13A2Q13183 592 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CIRBPQ14011 172 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC29A2Q14542 456 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZNF267Q14586 743 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PLS1Q14651 629 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KCNAB1Q14722 419 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 EFTUD2Q15029 972 aaKnown RBP eCLIP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SIX1Q15475 284 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TAF13Q15543 124 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZNF630Q2M218 657 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SBK1Q52WX2 424 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ACSM2BQ68CK6 577 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TXNRD3NBQ6F5E7 133 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZNF880Q6PDB4 577 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC25A47Q6Q0C1 308 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 Q6ZRN7 208 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GRINAQ7Z429 371 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZER1Q7Z7L7 766 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 APOBEC3FQ8IUX4 373 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 LRRC49Q8IUZ0 686 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 WDR75Q8IWA0 830 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GALNT15Q8N3T1 639 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CELF5Q8N6W0 485 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ENDOVQ8N8Q3 282 aaKnown RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 AVL9Q8NBF6 648 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 HJURPQ8NCD3 748 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 AGBL3Q8NEM8 1001 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR6T1Q8NGN1 323 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR10G7Q8NGN6 311 aa-0.91□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR6B3Q8NGW1 331 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms