RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 AGAP14A8MT82 685 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 CFAP99D6REC4 459 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 CST8O60676 142 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 AGTP01019 485 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 CDKN2BP42772 138 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 CD151P48509 253 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 PER3P56645 1201 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 DCDP81605 110 aaKnown RBP15.23■□□□□ 0.03
LMNA-223ENST00000515459 CYP2A13Q16696 494 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 C1orf189Q5VU69 101 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 SPESP1Q6UW49 350 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 ADGRF3Q8IZF5 1079 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 PHC3Q8NDX5 983 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 PROKR1Q8TCW9 393 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 HEXDCQ8WVB3 486 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 P3H4Q92791 437 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.23■□□□□ 0.037e-6■■■■■ 27.5
LMNA-223ENST00000515459 ULK4Q96C45 1275 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 GBP5Q96PP8 586 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 OR52A5Q9H2C5 316 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 MVB12BQ9H7P6 319 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 COG4Q9H9E3 785 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 ZBTB20Q9HC78 741 aaPredicted RBP15.23■□□□□ 0.03
LMNA-223ENST00000515459 FAM60AQ9NP50 221 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 ATP13A2Q9NQ11 1180 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 ACTR10Q9NZ32 417 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 IFT80Q9P2H3 777 aaPredicted RBP15.23■□□□□ 0.03
LMNA-223ENST00000515459 RSPH14Q9UHP6 348 aa15.23■□□□□ 0.03
LMNA-223ENST00000515459 ANKRD12Q6UB98 2062 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 C5orf60A6NFR6 353 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 H3BMH7 237 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 MASP2O00187 686 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 LRRTM2O43300 516 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 HNRNPRO43390 633 aaKnown RBP15.22■□□□□ 0.03
LMNA-223ENST00000515459 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 ATP1B2P14415 290 aaPredicted RBP15.22■□□□□ 0.03
LMNA-223ENST00000515459 SLC1A1P43005 524 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 XIAPP98170 497 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 ASTE1Q2TB18 679 aaPredicted RBP15.22■□□□□ 0.03
LMNA-223ENST00000515459 KAZNQ674X7 775 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 PPP1R32Q7Z5V6 425 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 KCNMB4Q86W47 210 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 RHOT2Q8IXI1 618 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 NXPE1Q8N323 547 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 C19orf47Q8N9M1 422 aaKnown RBP15.22■□□□□ 0.03
LMNA-223ENST00000515459 MARVELD3Q96A59 401 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 COPS8Q99627 209 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 WDR77Q9BQA1 342 aaPredicted RBP15.22■□□□□ 0.03
LMNA-223ENST00000515459 FICDQ9BVA6 458 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 SPRTNQ9H040 489 aaPredicted RBP15.22■□□□□ 0.03
LMNA-223ENST00000515459 XKR8Q9H6D3 395 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 TRHDEQ9UKU6 1024 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 CDYLQ9Y232 598 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 POLEQ07864 2286 aa15.22■□□□□ 0.03
LMNA-223ENST00000515459 AGPSO00116 658 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 ANXA9O76027 345 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 ITGA3P26006 1051 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 PDHA2P29803 388 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 GEMP55040 296 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 AIMP2Q13155 320 aaKnown RBP15.21■□□□□ 0.03
LMNA-223ENST00000515459 PRKG2Q13237 762 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 NAA30Q147X3 362 aaPredicted RBP15.21■□□□□ 0.03
LMNA-223ENST00000515459 SLC9A5Q14940 896 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 TAZQ16635 292 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 DEFB110Q30KQ9 67 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 MRPL14Q6P1L8 145 aaKnown RBP15.21■□□□□ 0.03
LMNA-223ENST00000515459 TFGQ92734 400 aaPredicted RBP15.21■□□□□ 0.03
LMNA-223ENST00000515459 MOCOSQ96EN8 888 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 HGH1Q9BTY7 390 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 FAM96AQ9H5X1 160 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 VPS37BQ9H9H4 285 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 DHCR7Q9UBM7 475 aaKnown RBP15.21■□□□□ 0.03
LMNA-223ENST00000515459 SRPK3Q9UPE1 567 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 ENTPD4Q9Y227 616 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
LMNA-223ENST00000515459 DIDO1Q9BTC0 2240 aaKnown RBP15.21■□□□□ 0.03
LMNA-223ENST00000515459 ZSCAN9O15535 394 aaPredicted RBP15.2■□□□□ 0.02
LMNA-223ENST00000515459 HCRTR1O43613 425 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 SPOPO43791 374 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 AKR1B10O60218 316 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 CNOT3O75175 753 aaKnown RBP15.2■□□□□ 0.02
LMNA-223ENST00000515459 CRTAMO95727 393 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 UMODP07911 640 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 ITGALP20701 1170 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 GABRA4P48169 554 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 RPA4Q13156 261 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 BOP1Q14137 746 aaKnown RBP15.2■□□□□ 0.02
LMNA-223ENST00000515459 ZRSR2Q15696 482 aaKnown RBP15.2■□□□□ 0.02
LMNA-223ENST00000515459 NKAIN1Q4KMZ8 207 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 ZNF658BQ4V348 819 aaPredicted RBP15.2■□□□□ 0.02
LMNA-223ENST00000515459 TLDC1Q6P9B6 456 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 RANBP10Q6VN20 620 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 SNX20Q7Z614 316 aa15.2■□□□□ 0.02
LMNA-223ENST00000515459 LUZP1Q86V48 1076 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms