RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 LOC400499M0QZD8 3231 aa12.42□□□□□ -0.42
CLCN3-210ENST00000515420 IGHV5-51A0A0C4DH38 117 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 C2orf74A8MZ97 194 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 FANCGO15287 622 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 ZBTB11O95625 1053 aaPredicted RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 DLGAP3O95886 979 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 MSL3P1P0C860 447 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 FGF5P12034 268 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 PGAM1P18669 254 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 ATP5DP30049 168 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 SHMT2P34897 504 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 SEPHS1P49903 392 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 KPNA2P52292 529 aaKnown RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 EIF3BP55884 814 aaKnown RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 PPP1CAP62136 330 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 ETF1P62495 437 aaKnown RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 CXADRP78310 365 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 HSD11B2P80365 405 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 ACY1Q03154 408 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 HSPA14Q0VDF9 509 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 MORF4L2Q15014 288 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 BRD3Q15059 726 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 LONRF1Q17RB8 773 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 KCTD19Q17RG1 926 aaPredicted RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 CTSL3PQ5NE16 218 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 PLEKHS1Q5SXH7 462 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 IZUMO3Q5VZ72 239 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 CCDC81Q6ZN84 652 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 D2HGDHQ8N465 521 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 SIDT2Q8NBJ9 832 aaKnown RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 PHC3Q8NDX5 983 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 OR4E2Q8NGC2 313 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 OR5AR1Q8NGP9 310 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 OR8K5Q8NH50 307 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 GABPB2Q8TAK5 448 aaPredicted RBP12.41□□□□□ -0.42
CLCN3-210ENST00000515420 LKAAEAR1Q8TD35 194 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 NKD1Q969G9 470 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 STAMBPL1Q96FJ0 436 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 CRELD1Q96HD1 420 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 HGH1Q9BTY7 390 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 PITPNM3Q9BZ71 974 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 TWSG1Q9GZX9 223 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 PDE7BQ9NP56 450 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 LATS2Q9NRM7 1088 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 OR6C2Q9NZP2 312 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 MAD1L1Q9Y6D9 718 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 FAM169AQ9Y6X4 670 aa12.41□□□□□ -0.42
CLCN3-210ENST00000515420 MGAQ8IWI9 3026 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 BTN3A1O00481 513 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 STK17BO94768 372 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 POLR2CP19387 275 aaPredicted RBP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 ARL4DP49703 201 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 SH3BP2P78314 561 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 RHDQ02161 417 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 FOXM1Q08050 763 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 THOC5Q13769 683 aaKnown RBP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 GBX1Q14549 363 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 TGIF1Q15583 401 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 MANEAQ5SRI9 462 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 TMTC4Q5T4D3 741 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 ZNF470Q6ECI4 717 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 CENPUQ71F23 418 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 OTOAQ7RTW8 1153 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 PPP1R3BQ86XI6 285 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 DCUN1D3Q8IWE4 304 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 KLHL7Q8IXQ5 586 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 ADGRF3Q8IZF5 1079 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 CACNA2D3Q8IZS8 1091 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 NLGN4XQ8N0W4 816 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 AGGF1Q8N302 714 aaeCLIP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 LSM14AQ8ND56 463 aaKnown RBP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 NLGN4YQ8NFZ3 816 aaPredicted RBP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 GSDMBQ8TAX9 411 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 LRRC39Q96DD0 335 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 OR6C1Q96RD1 312 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 UBL7Q96S82 380 aaPredicted RBP12.4□□□□□ -0.42
CLCN3-210ENST00000515420 CTRCQ99895 268 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 FAM167BQ9BTA0 163 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 CPNE5Q9HCH3 593 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 SYTL2Q9HCH5 934 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 APMAPQ9HDC9 416 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 ICKQ9UPZ9 632 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.42
CLCN3-210ENST00000515420 PIPSLA2A3N6 862 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 GOLGA8TH3BQL2 631 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 BTN3A3O00478 584 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 RAD1O60671 282 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 SEC31AO94979 1220 aaKnown RBP12.39□□□□□ -0.43
CLCN3-210ENST00000515420 S1PR4O95977 384 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 PKMP14618 531 aaKnown RBP12.39□□□□□ -0.43
CLCN3-210ENST00000515420 ITGB6P18564 788 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 CDH3P22223 829 aa12.39□□□□□ -0.43
CLCN3-210ENST00000515420 PRDX3P30048 256 aaKnown RBP12.39□□□□□ -0.43
CLCN3-210ENST00000515420 CASQ1P31415 396 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms