RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 BANPQ8N9N5 519 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 GPR156Q8NFN8 814 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 OR5K2Q8NHB8 316 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 TFGQ92734 400 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 TCEAL3Q969E4 200 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 APOPT1Q96IL0 206 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 FOPNLQ96NB1 174 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 INSM2Q96T92 566 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC12A9Q9BXP2 914 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 UCK1Q9HA47 277 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 IL21RQ9HBE5 538 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 FSCN3Q9NQT6 498 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 PRDM8Q9NQV8 689 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 POT1Q9NUX5 634 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 NCKIPSDQ9NZQ3 722 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 DCHS1Q96JQ0 3298 aa11.69□□□□□ -0.54
PDLIM5-220ENST00000514830 PDZK1P1A8MUH7 402 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 HMGB1P1B2RPK0 211 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PRPF4O43172 522 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 TYROBPO43914 113 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 NOBOXO60393 691 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CATP04040 527 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 RBP1P09455 135 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 UBE2IP63279 158 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CDKL1Q00532 357 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 IRF9Q00978 393 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CSHL1Q14406 222 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CLCA4Q14CN2 919 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 SUZ12Q15022 739 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 SF3A2Q15428 464 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CCDC6Q16204 474 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PPP1R3AQ16821 1122 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 INAVAQ3KP66 663 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 KLC3Q6P597 504 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PRR23CQ6ZRP0 262 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 ISCA2Q86U28 154 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 DCUN1D3Q8IWE4 304 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 SRRM1Q8IYB3 904 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PLD6Q8N2A8 252 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 FAM46DQ8NEK8 389 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 MAGEC3Q8TD91 643 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 KCTD4Q8WVF5 259 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 NXNL1Q96CM4 212 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 C12orf66Q96MD2 445 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CNTNAP3BQ96NU0 1288 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 SMC6Q96SB8 1091 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 CNTNAP3Q9BZ76 1288 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 TWSG1Q9GZX9 223 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 VPS11Q9H270 941 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 SMOC1Q9H4F8 434 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PARVBQ9HBI1 364 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PARD6AQ9NPB6 346 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 MED4Q9NPJ6 270 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 PCMTD2Q9NV79 361 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 ZNF624Q9P2J8 865 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 POLG2Q9UHN1 485 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 GRID1Q9ULK0 1009 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 DOLKQ9UPQ8 538 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 COLEC10Q9Y6Z7 277 aa11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 ASCC3Q8N3C0 2202 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-220ENST00000514830 GOLGA4Q13439 2230 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 TARM1B6A8C7 271 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 MYO1CO00159 1063 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 FLRT2O43155 660 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 ZBTB14O43829 449 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 KDM1AO60341 852 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SNX2O60749 519 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 KERAO60938 352 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SDC3O75056 442 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 C1orf105O95561 183 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SYF2O95926 243 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC19A1P41440 591 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 AP1S2P56377 157 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 NR1D2Q14995 579 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 CCDC153Q494R4 210 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 C14orf28Q4W4Y0 310 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 TECRLQ5HYJ1 363 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 ZNF438Q7Z4V0 828 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC9B2Q86UD5 537 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 TMEM151AQ8N4L1 468 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 GOLGA6L1Q8N7Z2 621 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 ARL10Q8N8L6 244 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 PHC3Q8NDX5 983 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 OR6C4Q8NGE1 309 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 STAG3L4Q8TBR4 150 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 MAPK15Q8TD08 544 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 ARL8AQ96BM9 186 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 PTERQ96BW5 349 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 TSNARE1Q96NA8 513 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 ATOH8Q96SQ7 321 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 MRPL57Q9BQC6 102 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 EDEM2Q9BV94 578 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 GTPBP2Q9BX10 602 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms