RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RPS6KA2Q15349 733 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 SYTL3Q4VX76 610 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 PDCD4Q53EL6 469 aaKnown RBP14.61□□□□□ -0.07
VCAN-211ENST00000513984 PIP5KL1Q5T9C9 394 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 TMEM220Q6QAJ8 160 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 SFRP1Q8N474 314 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 TMEM159Q96B96 161 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 ROPN1LQ96C74 230 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 RPP25Q9BUL9 199 aaKnown RBP14.61□□□□□ -0.07
VCAN-211ENST00000513984 HEBP1Q9NRV9 189 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 C15orf41Q9Y2V0 281 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 NDUFAF1Q9Y375 327 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 CCL27Q9Y4X3 112 aa14.61□□□□□ -0.07
VCAN-211ENST00000513984 NUMA1Q14980 2115 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 LOC730098B7Z3J9 87 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 K7ESM1 405 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 NR5A2O00482 541 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 LSM1O15116 133 aaKnown RBP14.6□□□□□ -0.07
VCAN-211ENST00000513984 NPC1O15118 1278 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 CFLARO15519 480 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 LILRB5O75023 590 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 CAPN3P20807 821 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 MTHFRP42898 656 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 MAPK9P45984 424 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 GPR1P46091 355 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 CAMK2GQ13555 558 aaPredicted RBP14.6□□□□□ -0.07
VCAN-211ENST00000513984 GGTA1PQ4G0N0 100 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 COQ5Q5HYK3 327 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 RAET1GQ6H3X3 334 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 BLOC1S3Q6QNY0 202 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 PCYOX1LQ8NBM8 494 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 CXorf40AQ8TE69 158 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 FBXL8Q96CD0 374 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 RSPH9Q9H1X1 276 aaPredicted RBP14.6□□□□□ -0.07
VCAN-211ENST00000513984 SLC52A3Q9NQ40 469 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 ZIM2Q9NZV7 527 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 ANGPTL2Q9UKU9 493 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 RNF11Q9Y3C5 154 aa14.6□□□□□ -0.07
VCAN-211ENST00000513984 SYNCRIPO60506 623 aaKnown RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 ME2P23368 584 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 DRD3P35462 400 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 ZFP36L2P47974 494 aaKnown RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 NME5P56597 212 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 EMX2Q04743 252 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 RCAN2Q14206 197 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 SMU1Q2TAY7 513 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 PTCHD3Q3KNS1 767 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 MTSS1LQ765P7 747 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 ADGRG6Q86SQ4 1221 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 RETREG3Q86VR2 466 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 SLC22A15Q8IZD6 547 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 FNDC5Q8NAU1 212 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 KCNV2Q8TDN2 545 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 USP7Q93009 1102 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 S100A14Q9HCY8 104 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 PACSIN3Q9UKS6 424 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 ARHGEF33A8MVX0 844 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 E7ENX8 843 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 SLC28A1O00337 649 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 AP1G1O43747 822 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 CLDN9O95484 217 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 ANPEPP15144 967 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 XRCC1P18887 633 aaPredicted RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 TNFRSF4P43489 277 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 NR6A1Q15406 480 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 TRIM46Q7Z4K8 759 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 LILRA3Q8N6C8 439 aaPredicted RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 ZNF513Q8N8E2 541 aaPredicted RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 ZNF514Q96K75 400 aaPredicted RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 PPP3R2Q96LZ3 170 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 ANKRD27Q96NW4 1050 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 C1orf50Q9BV19 199 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 TRIM39Q9HCM9 518 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 SPAG4Q9NPE6 437 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 MRPL40Q9NQ50 206 aaKnown RBP14.59□□□□□ -0.07
VCAN-211ENST00000513984 GULP1Q9UBP9 304 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 KLQ9UEF7 1012 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 CROTQ9UKG9 612 aa14.59□□□□□ -0.07
VCAN-211ENST00000513984 BRWD1Q9NSI6 2320 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 MANBAO00462 879 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 TRIM38O00635 465 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 FFAR3O14843 346 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 LIN7AO14910 233 aaPredicted RBP14.58□□□□□ -0.08
VCAN-211ENST00000513984 ANGPT2O15123 496 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 GPR42O15529 346 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 RGS14O43566 566 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 ULK1O75385 1050 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 PREPP48147 710 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 SOX9P48436 509 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 ERFP50548 548 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 SESN3P58005 492 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 CST6Q15828 149 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.58□□□□□ -0.08
VCAN-211ENST00000513984 SWT1Q5T5J6 900 aaKnown RBP14.58□□□□□ -0.08
VCAN-211ENST00000513984 AGBL4Q5VU57 503 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 LRRC74BQ6ZQY2 392 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 TRIM74Q86UV6 250 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 KBTBD6Q86V97 674 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 KLHDC8AQ8IYD2 350 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 CHPFQ8IZ52 775 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms