RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, human

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-211	ENST00000513803	TMEM151B	Q8IW70	566 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	OR11G2	Q8NGC1	345 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	SUN3	Q8TAQ9	357 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	DTX3L	Q8TDB6	740 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	DENND1A	Q8TEH3	1009 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	CA5BP1	Q8WTZ4	195 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	FKBP10	Q96AY3	582 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	MAGED4	Q96JG8	741 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	TSGA13	Q96PP4	275 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	CCM2	Q9BSQ5	444 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	CHRNA10	Q9GZZ6	450 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	CLSTN2	Q9H4D0	955 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	PLA2G3	Q9NZ20	509 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	TINAG	Q9UJW2	476 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	MEMO1	Q9Y316	297 aa		10.45	□□□□□ -0.74
NFKB1-211	ENST00000513803	NSD1	Q96L73	2696 aa	Predicted RBP	10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	BTN3A3	O00478	584 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	MLYCD	O95822	493 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	HLA-DQB2	P05538	268 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	MMP2	P08253	660 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	IL1R2	P27930	398 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	PBLD	P30039	288 aa	Predicted RBP	10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	LTB	Q06643	244 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	KRTCAP3	Q53RY4	240 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	FNBP1L	Q5T0N5	605 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	ZDHHC20	Q5W0Z9	365 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	TMEM200A	Q86VY9	491 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	SPPL2C	Q8IUH8	684 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	KBTBD2	Q8IY47	623 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	C19orf47	Q8N9M1	422 aa	Known RBP	10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	OR2L2	Q8NH16	312 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	SPATA3	Q8NHX4	192 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	DLG3	Q92796	817 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	FERD3L	Q96RJ6	166 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	DEF6	Q9H4E7	631 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	TFB2M	Q9H5Q4	396 aa	Known RBP	10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	FAM60A	Q9NP50	221 aa		10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	NXT1	Q9UKK6	140 aa	Known RBP	10.44	□□□□□ -0.74
NFKB1-211	ENST00000513803	INTS1	Q8N201	2190 aa	Known RBP	10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	BTN3A1	O00481	513 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	PRAMEF2	O60811	474 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	MT-CYB	P00156	380 aa	Predicted RBP	10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	HP	P00738	406 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	POLB	P06746	335 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	CCDC172	P0C7W6	258 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	RARA	P10276	462 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	MSH3	P20585	1137 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	UGT1A4	P22310	534 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	FDXR	P22570	491 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	HMGCL	P35914	325 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	ARSF	P54793	590 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	FOLH1	Q04609	750 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	FOXD4	Q12950	439 aa	Predicted RBP	10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	PPP2R5E	Q16537	467 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	NKG7	Q16617	165 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	CES4A	Q5XG92	561 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	SPESP1	Q6UW49	350 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	AMIGO1	Q86WK6	493 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	EID3	Q8N140	333 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	DDHD1	Q8NEL9	900 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	THAP3	Q8WTV1	239 aa	Predicted RBP	10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	NINJ1	Q92982	152 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	TRIB3	Q96RU7	358 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	ZNF559	Q9BR84	538 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	TMEM121	Q9BTD3	319 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	SLC26A1	Q9H2B4	701 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	PCDH18	Q9HCL0	1135 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	BPIFA1	Q9NP55	256 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	IL26	Q9NPH9	171 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	SLC22A11	Q9NSA0	550 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	ACTR10	Q9NZ32	417 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	PTGFRN	Q9P2B2	879 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	ZNF835	Q9Y2P0	537 aa		10.43	□□□□□ -0.74
NFKB1-211	ENST00000513803	ATR	Q13535	2644 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	UGT1A9	O60656	530 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	ONECUT2	O95948	504 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	UQCRH	P07919	91 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	ACPP	P15309	386 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	UGT1A6	P19224	532 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	MX2	P20592	715 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	UGT1A1	P22309	533 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	EEF1G	P26641	437 aa	Known RBP	10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	GABRA4	P48169	554 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	CARS	P49589	748 aa	Known RBP	10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	KLK7	P49862	253 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	SRSF11	Q05519	484 aa	Known RBP	10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	ITGA9	Q13797	1035 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	KRT81	Q14533	505 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	PCOLCE	Q15113	449 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	DEFB110	Q30KQ9	67 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	TCP11X2	Q5H9J9	407 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	FKBP15	Q5T1M5	1219 aa		10.42	□□□□□ -0.74
NFKB1-211	ENST00000513803	GPRC6A	Q5T6X5	926 aa		10.42	□□□□□ -0.74

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