RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CCNG1P51959 295 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 MTTPP55157 894 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TAS2R38P59533 333 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ACTR3P61158 418 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 RPS14P62263 151 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 ERVK-8P63133 956 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 MRPS21P82921 87 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 SLC25A3Q00325 362 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 EMX2Q04743 252 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 RPA4Q13156 261 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 GTF2H3Q13889 308 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 LRP8Q14114 963 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 BOP1Q14137 746 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 E2F2Q14209 437 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 C18orf21Q32NC0 220 aaPredicted RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 MAP7D1Q3KQU3 841 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 LRIT3Q3SXY7 679 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 POM121L1PQ3SYA9 428 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 SPATS1Q496A3 300 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TMEM196Q5HYL7 178 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 SDE2Q6IQ49 451 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 LETMD1Q6P1Q0 360 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 C8orf82Q6P1X6 216 aaPredicted RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 PNCKQ6P2M8 343 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 NEK5Q6P3R8 708 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 AAGABQ6PD74 315 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TMEM220Q6QAJ8 160 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 Q6ZSR9 355 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 DET1Q7L5Y6 550 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TRMT11Q7Z4G4 463 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 TRIM46Q7Z4K8 759 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 DDIASQ8IXT1 998 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CHPFQ8IZ52 775 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 DSELQ8IZU8 1212 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 MIER2Q8N344 545 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 AADATQ8N5Z0 425 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 L3MBTL4Q8NA19 623 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 OR52B6Q8NGF0 335 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 OR2L2Q8NH16 312 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 METTL6Q8TCB7 284 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 USP7Q93009 1102 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ATP6V1E2Q96A05 226 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ESAMQ96AP7 390 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TMEM159Q96B96 161 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ROPN1LQ96C74 230 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TUBGCP3Q96CW5 907 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 HIC2Q96JB3 615 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CCDC138Q96M89 665 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 FAM161BQ96MY7 647 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 SERPINI1Q99574 410 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 DPEP2Q9H4A9 486 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 RNPEPL1Q9HAU8 725 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 MRPL40Q9NQ50 206 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 HEBP1Q9NRV9 189 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 AIG1Q9NVV5 245 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ARL15Q9NXU5 204 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ZIM2Q9NZV7 527 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 SLC7A8Q9UHI5 535 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CD207Q9UJ71 328 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 NDUFAF1Q9Y375 327 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CCL27Q9Y4X3 112 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 TIMM22Q9Y584 194 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 ANGPTL3Q9Y5C1 460 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 PCM1Q15154 2024 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 DOCK9Q9BZ29 2069 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 NUMA1Q14980 2115 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 KCNE1BA0A087WTH5 132 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ATP6AP2A0A1C7CYW4 349 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 MGAT4DA6NG13 374 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 OR2AG2A6NM03 316 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 LOC730098B7Z3J9 87 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 IFRD1O00458 451 aaPredicted RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 MID1O15344 667 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 NRP2O60462 931 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 SYNCRIPO60506 623 aaKnown RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 KCNJ13O60928 360 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 FKBP6O75344 327 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 MTX2O75431 263 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ATP6AP2O75787 350 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 CLDN9O95484 217 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 LINC00032P0C843 101 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ACPPP15309 386 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 EPORP19235 508 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 HMOX2P30519 316 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 TRIM23P36406 574 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 SFSWAPQ12872 951 aaKnown RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 MAD2L1Q13257 205 aaPredicted RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 GRB7Q14451 532 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 STARD3Q14849 445 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 ZXDCQ2QGD7 858 aaPredicted RBP8.17□□□□□ -1.1
RNF4-220ENST00000513578 SYTL3Q4VX76 610 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 AGKQ53H12 422 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 FBXO48Q5FWF7 155 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 C6orf136Q5SQH8 315 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 RAET1GQ6H3X3 334 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 KIAA1161Q6NSJ0 714 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 XKR5Q6UX68 686 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 UNC5DQ6UXZ4 953 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 FUNDC1Q8IVP5 155 aa8.17□□□□□ -1.1
RNF4-220ENST00000513578 DEFB107AQ8IZN7 70 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms