RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FAM189A2Q15884 450 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 OTUD3Q5T2D3 398 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 PTCRAQ6ISU1 281 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 MON1BQ7L1V2 547 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C4orf32Q8N8J7 132 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TXNDC5Q8NBS9 432 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 GLB1L3Q8NCI6 653 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TRPV1Q8NER1 839 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TMEM234Q8WY98 164 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ABCG8Q9H221 673 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TFB2MQ9H5Q4 396 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 DMAC2Q9NW81 257 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 IKZF3Q9UKT9 509 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PCDHGB7Q9Y5F8 929 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 MAGEA13PA6NCF6 341 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 SCAMP1O15126 338 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 RSL1D1O76021 490 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TARSP26639 723 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 CST5P28325 142 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TGFBR2P37173 567 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZNF41P51814 821 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 GYS2P54840 703 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PPP3R1P63098 170 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TCTE1Q5JU00 501 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GTF2IRD2BQ6EKJ0 949 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TMEM110Q86TL2 294 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GTF2IRD2Q86UP8 949 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 KIAA2013Q8IYS2 634 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C8orf59Q8N0T1 100 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TSSK3Q96PN8 268 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TRNT1Q96Q11 434 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 RHOBTB2Q9BYZ6 727 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZNF576Q9H609 170 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CAB39LQ9H9S4 337 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DIABLOQ9NR28 239 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 HRASLS2Q9NWW9 162 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 COQ4Q9Y3A0 265 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ATXN2Q99700 1313 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TMEM265A0A087WTH1 108 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 A0A1W2PQU0 124 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DFNA5O60443 496 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LRCH4O75427 683 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 IL6P05231 212 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 KCNA3P22001 575 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 HSF2Q03933 536 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LMAN2Q12907 356 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PON2Q15165 354 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TAB1Q15750 504 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 WASHC2DQ5SRD0 308 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TSPAN14Q8NG11 270 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C7orf43Q8WVR3 580 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DAZLQ92904 295 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 TNFRSF25Q93038 417 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C1orf74Q96LT6 269 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CDRT15Q96T59 188 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PTPN18Q99952 460 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 ASPNQ9BXN1 380 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TLR10Q9BXR5 811 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C8orf4Q9NR00 106 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PDP2Q9P2J9 529 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 A8MUA0 341 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CDC7O00311 574 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DCXO43602 365 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LRATO95237 230 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 C2P06681 752 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LINC00032P0C843 101 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GBX1Q14549 363 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CUZD1Q86UP6 607 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 RALGPS2Q86X27 583 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 ZNF567Q8N184 647 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 BHLHE22Q8NFJ8 381 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 NR4A3Q92570 626 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 SDCBP2Q9H190 292 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 NOL11Q9H8H0 719 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 SPAG4Q9NPE6 437 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TMEM248Q9NWD8 314 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CRNNQ9UBG3 495 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 GMPPBQ9Y5P6 360 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 IRAK3Q9Y616 596 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 RBMXL2O75526 392 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 IL7RP16871 459 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 HNRNPA2B1P22626 353 aaKnown RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 ABCG1P45844 678 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 IRAK1P51617 712 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PLA2G16P53816 162 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CRISP3P54108 245 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 BTN3A2P78410 334 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CBX3Q13185 183 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CHRNA6Q15825 494 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CST6Q15828 149 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 DPYSL2Q16555 572 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 LIN54Q6MZP7 749 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 PIM3Q86V86 326 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 UBE2J2Q8N2K1 259 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 OR4E2Q8NGC2 313 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 GINS4Q9BRT9 223 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 NAA11Q9BSU3 229 aaPredicted RBP4.17□□□□□ -1.74
VCAN-209ENST00000513016 C1QTNF1Q9BXJ1 281 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 TRIM2Q9C040 744 aa4.17□□□□□ -1.74
VCAN-209ENST00000513016 CLEC4MQ9H2X3 399 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms