RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 WFDC11Q8NEX6 87 aa8.8□□□□□ -1
NUP54-211ENST00000512151 NUDT8Q8WV74 236 aa8.8□□□□□ -1
NUP54-211ENST00000512151 GLYATL1Q969I3 302 aa8.8□□□□□ -1
NUP54-211ENST00000512151 LYSMD1Q96S90 227 aa8.8□□□□□ -1
NUP54-211ENST00000512151 PEBP4Q96S96 227 aa8.8□□□□□ -1
NUP54-211ENST00000512151 INSM2Q96T92 566 aaPredicted RBP8.8□□□□□ -1
NUP54-211ENST00000512151 BAG1Q99933 345 aaPredicted RBP8.8□□□□□ -1
NUP54-211ENST00000512151 SPATA16Q9BXB7 569 aa8.8□□□□□ -1
NUP54-211ENST00000512151 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
NUP54-211ENST00000512151 DHX35Q9H5Z1 703 aaKnown RBP8.8□□□□□ -1
NUP54-211ENST00000512151 NT5MQ9NPB1 228 aa8.8□□□□□ -1
NUP54-211ENST00000512151 SPTLC3Q9NUV7 552 aa8.8□□□□□ -1
NUP54-211ENST00000512151 SEPT11Q9NVA2 429 aaKnown RBP8.8□□□□□ -1
NUP54-211ENST00000512151 ETNK2Q9NVF9 386 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ZNF358Q9NW07 568 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ZNHIT6Q9NWK9 470 aaKnown RBP8.8□□□□□ -1
NUP54-211ENST00000512151 NDOR1Q9UHB4 597 aa8.8□□□□□ -1
NUP54-211ENST00000512151 SLC24A2Q9UI40 661 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ST6GALNAC2Q9UJ37 374 aa8.8□□□□□ -1
NUP54-211ENST00000512151 ADAM21Q9UKJ8 722 aa8.8□□□□□ -1
NUP54-211ENST00000512151 PROM1O43490 865 aa8.79□□□□□ -1
NUP54-211ENST00000512151 VEGFDO43915 354 aa8.79□□□□□ -1
NUP54-211ENST00000512151 CDK14O94921 469 aa8.79□□□□□ -1
NUP54-211ENST00000512151 HBQ1P09105 142 aa8.79□□□□□ -1
NUP54-211ENST00000512151 MTHFD1P11586 935 aaKnown RBP8.79□□□□□ -1
NUP54-211ENST00000512151 UGT1A4P22310 534 aa8.79□□□□□ -1
NUP54-211ENST00000512151 HALP42357 657 aa8.79□□□□□ -1
NUP54-211ENST00000512151 MMP13P45452 471 aa8.79□□□□□ -1
NUP54-211ENST00000512151 TMPRSS15P98073 1019 aa8.79□□□□□ -1
NUP54-211ENST00000512151 DSC2Q02487 901 aa8.79□□□□□ -1
NUP54-211ENST00000512151 TFF3Q07654 80 aa8.79□□□□□ -1
NUP54-211ENST00000512151 DPYSQ14117 519 aa8.79□□□□□ -1
NUP54-211ENST00000512151 SLC18A3Q16572 532 aa8.79□□□□□ -1
NUP54-211ENST00000512151 NKAIN1Q4KMZ8 207 aa8.79□□□□□ -1
NUP54-211ENST00000512151 RALGPS1Q5JS13 557 aa8.79□□□□□ -1
NUP54-211ENST00000512151 IRAK1BP1Q5VVH5 260 aa8.79□□□□□ -1
NUP54-211ENST00000512151 RHBDD2Q6NTF9 364 aa8.79□□□□□ -1
NUP54-211ENST00000512151 ARMC6Q6NXE6 501 aa8.79□□□□□ -1
NUP54-211ENST00000512151 C3P1Q6ZMU1 363 aa8.79□□□□□ -1
NUP54-211ENST00000512151 CYP4V2Q6ZWL3 525 aaPredicted RBP8.79□□□□□ -1
NUP54-211ENST00000512151 SPPL2CQ8IUH8 684 aa8.79□□□□□ -1
NUP54-211ENST00000512151 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
NUP54-211ENST00000512151 NDUFAF2Q8N183 169 aa8.79□□□□□ -1
NUP54-211ENST00000512151 AMER2Q8N7J2 671 aa8.79□□□□□ -1
NUP54-211ENST00000512151 DNAAF3Q8N9W5 541 aa8.79□□□□□ -1
NUP54-211ENST00000512151 LPCAT1Q8NF37 534 aa8.79□□□□□ -1
NUP54-211ENST00000512151 PSMF1Q92530 271 aa8.79□□□□□ -1
NUP54-211ENST00000512151 SDCCAG3Q96C92 435 aa8.79□□□□□ -1
NUP54-211ENST00000512151 DMRTA2Q96SC8 542 aa8.79□□□□□ -1
NUP54-211ENST00000512151 C17orf62Q9BQA9 187 aa8.79□□□□□ -1
NUP54-211ENST00000512151 ZNF559Q9BR84 538 aa8.79□□□□□ -1
NUP54-211ENST00000512151 NUP85Q9BW27 656 aa8.79□□□□□ -1
NUP54-211ENST00000512151 ISCUQ9H1K1 167 aa8.79□□□□□ -1
NUP54-211ENST00000512151 SYTL2Q9HCH5 934 aa8.79□□□□□ -1
NUP54-211ENST00000512151 GPAMQ9HCL2 828 aa8.79□□□□□ -1
NUP54-211ENST00000512151 FAM60AQ9NP50 221 aa8.79□□□□□ -1
NUP54-211ENST00000512151 C1GALT1Q9NS00 363 aa8.79□□□□□ -1
NUP54-211ENST00000512151 IMP3Q9NV31 184 aaKnown RBP8.79□□□□□ -1
NUP54-211ENST00000512151 PKD2L2Q9NZM6 624 aa8.79□□□□□ -1
NUP54-211ENST00000512151 CDC23Q9UJX2 597 aa8.79□□□□□ -1
NUP54-211ENST00000512151 TFR2Q9UP52 801 aa8.79□□□□□ -1
NUP54-211ENST00000512151 PLEKHA6Q9Y2H5 1048 aa8.79□□□□□ -1
NUP54-211ENST00000512151 REXO2Q9Y3B8 237 aaKnown RBP8.79□□□□□ -1
NUP54-211ENST00000512151 A0A0U1RQJ8 604 aa8.78□□□□□ -1
NUP54-211ENST00000512151 C17orf113A0A1B0GUU1 675 aa8.78□□□□□ -1
NUP54-211ENST00000512151 RGSL1A5PLK6 1076 aa8.78□□□□□ -1
NUP54-211ENST00000512151 NKX2-6A6NCS4 301 aa8.78□□□□□ -1
NUP54-211ENST00000512151 SIGLEC16A6NMB1 481 aa8.78□□□□□ -1
NUP54-211ENST00000512151 DAPK3O43293 454 aa8.78□□□□□ -1
NUP54-211ENST00000512151 AKR1B10O60218 316 aa8.78□□□□□ -1
NUP54-211ENST00000512151 PRAMEF2O60811 474 aa8.78□□□□□ -1
NUP54-211ENST00000512151 RASAL1O95294 804 aa8.78□□□□□ -1
NUP54-211ENST00000512151 LY6G6DO95868 133 aa8.78□□□□□ -1
NUP54-211ENST00000512151 CRYABP02511 175 aaKnown RBP8.78□□□□□ -1
NUP54-211ENST00000512151 FTLP02792 175 aaPredicted RBP8.78□□□□□ -1
NUP54-211ENST00000512151 HEXAP06865 529 aa8.78□□□□□ -1
NUP54-211ENST00000512151 INHBBP09529 407 aa8.78□□□□□ -1
NUP54-211ENST00000512151 GZMAP12544 262 aa8.78□□□□□ -1
NUP54-211ENST00000512151 PCSK6P29122 969 aa8.78□□□□□ -1
NUP54-211ENST00000512151 GABRA4P48169 554 aa8.78□□□□□ -1
NUP54-211ENST00000512151 TERF1P54274 439 aa8.78□□□□□ -1
NUP54-211ENST00000512151 AIF1P55008 147 aa8.78□□□□□ -1
NUP54-211ENST00000512151 GSCP56915 257 aaPredicted RBP8.78□□□□□ -1
NUP54-211ENST00000512151 NFE2L1Q14494 772 aa8.78□□□□□ -1
NUP54-211ENST00000512151 ZIC1Q15915 447 aa8.78□□□□□ -1
NUP54-211ENST00000512151 QPCTQ16769 361 aa8.78□□□□□ -1
NUP54-211ENST00000512151 DEFB110Q30KQ9 67 aa8.78□□□□□ -1
NUP54-211ENST00000512151 TUBB8Q3ZCM7 444 aa8.78□□□□□ -1
NUP54-211ENST00000512151 CCDC122Q5T0U0 273 aa8.78□□□□□ -1
NUP54-211ENST00000512151 ALKBH5Q6P6C2 394 aaKnown RBP8.78□□□□□ -1
NUP54-211ENST00000512151 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
NUP54-211ENST00000512151 MON1BQ7L1V2 547 aa8.78□□□□□ -1
NUP54-211ENST00000512151 PHF13Q86YI8 300 aaPredicted RBP8.78□□□□□ -1
NUP54-211ENST00000512151 TRAPPC5Q8IUR0 188 aa8.78□□□□□ -1
NUP54-211ENST00000512151 TMTC1Q8IUR5 882 aa8.78□□□□□ -1
NUP54-211ENST00000512151 CHERPQ8IWX8 916 aaKnown RBP8.78□□□□□ -1
NUP54-211ENST00000512151 OR11G2Q8NGC1 345 aa8.78□□□□□ -1
NUP54-211ENST00000512151 OR4E2Q8NGC2 313 aa8.78□□□□□ -1
NUP54-211ENST00000512151 MAGED4Q96JG8 741 aa8.78□□□□□ -1
NUP54-211ENST00000512151 C18orf12Q96KH6 178 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms