RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CCDC73Q6ZRK6 1079 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 DSG4Q86SJ6 1040 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 BBS7Q8IWZ6 715 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 EXOC8Q8IYI6 725 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.41□□□□□ -1.54
GYPB-212ENST00000511198 FAM71DQ8N9W8 422 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 CHDHQ8NE62 594 aaPredicted RBP5.41□□□□□ -1.54
GYPB-212ENST00000511198 OR2T3Q8NH03 318 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 MBD3L2Q8NHZ7 208 aaPredicted RBP5.41□□□□□ -1.54
GYPB-212ENST00000511198 SUN3Q8TAQ9 357 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 SPPL2BQ8TCT7 592 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 GTF3C6Q969F1 213 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 ZNF396Q96N95 335 aaPredicted RBP5.41□□□□□ -1.54
GYPB-212ENST00000511198 FOXC2Q99958 501 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 TEKT3Q9BXF9 490 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 MCCC2Q9HCC0 563 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 PRMT7Q9NVM4 692 aaPredicted RBP5.41□□□□□ -1.54
GYPB-212ENST00000511198 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
GYPB-212ENST00000511198 V9GYY5 206 aaPredicted RBP5.41□□□□□ -1.54
GYPB-212ENST00000511198 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 SMCO2A6NFE2 343 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 STMND1H3BQB6 276 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 SCAMP1O15126 338 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 CNOT3O75175 753 aaKnown RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 OLFM2O95897 454 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 HTR1EP28566 365 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 CIITAP33076 1130 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 UGT1A3P35503 534 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 OSTNP61366 133 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 TXNL4AP83876 142 aaKnown RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 TLE4Q04727 773 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 GPS2Q13227 327 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 PRPF4BQ13523 1007 aaKnown RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 DAG1Q14118 895 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 ZNF234Q14588 700 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 ACOX1Q15067 660 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 CAMK4Q16566 473 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 ADCK5Q3MIX3 580 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 ZNF260Q3ZCT1 412 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 RRAGBQ5VZM2 374 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 NAPEPLDQ6IQ20 393 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 TMCO3Q6UWJ1 677 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 DSTYKQ6XUX3 929 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 WIPF2Q8TF74 440 aaPredicted RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 C2orf15Q8WU43 125 aaKnown RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 SNRNP40Q96DI7 357 aaKnown RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 C14orf79Q96F83 325 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 WACQ9BTA9 647 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 KRT23Q9C075 422 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 SLC25A32Q9H2D1 315 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 SAP30LQ9HAJ7 183 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 CWC15Q9P013 229 aaKnown RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.4□□□□□ -1.54
GYPB-212ENST00000511198 TBC1D14Q9P2M4 693 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 RCOR1Q9UKL0 485 aa5.4□□□□□ -1.54
GYPB-212ENST00000511198 MGAM2Q2M2H8 2515 aa5.4□□□□□ -1.55
GYPB-212ENST00000511198 ZANQ9Y493 2812 aa5.4□□□□□ -1.55
GYPB-212ENST00000511198 ZNF840PA6NDX5 716 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 C16orf96A6NNT2 1141 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 EFCAB8A8MWE9 144 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 NEDD8-MDP1E9PL57 170 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 H3BQV1 296 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 SH2B2O14492 632 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 IFIT3O14879 490 aaKnown RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 WDR47O94967 919 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 IL18RAPO95256 599 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 HEXAP06865 529 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 HMGB1P09429 215 aaKnown RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 TMEM191BP0C7N4 346 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 PNMA6AP0CW24 399 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 TMIGD3P0DMS9 266 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 ALPPL2P10696 532 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CYP2F1P24903 491 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 GALNSP34059 522 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 PIK3CBP42338 1070 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CCR5P51681 352 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CDH8P55286 799 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 KRT83P78385 493 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 ID2Q02363 134 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CCDC15Q0P6D6 951 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 TWIST1Q15672 202 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 DCAF4L1Q3SXM0 396 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 XKR9Q5GH70 373 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 JMJD6Q6NYC1 403 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 PIK3AP1Q6ZUJ8 805 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 C11orf57Q6ZUT1 292 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 IQCHQ86VS3 1027 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CACNA2D3Q8IZS8 1091 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 NECAB1Q8N987 351 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 FSIP1Q8NA03 581 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 ITLN2Q8WWU7 325 aaPredicted RBP5.39□□□□□ -1.55
GYPB-212ENST00000511198 SORCS1Q8WY21 1168 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 NRGNQ92686 78 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 OTUB2Q96DC9 234 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 PPP1R13BQ96KQ4 1090 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 SENP8Q96LD8 212 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 CCDC3Q9BQI4 270 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 ADPGKQ9BRR6 497 aa5.39□□□□□ -1.55
GYPB-212ENST00000511198 STRADBQ9C0K7 418 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms