RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ADGRF3Q8IZF5 1079 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 ZNF248Q8NDW4 579 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 KCNE4Q8WWG9 221 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 CFAP36Q96G28 342 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 IL17FQ96PD4 163 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 TAAR9Q96RI9 348 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 EBNA1BP2Q99848 306 aaKnown RBP13.18□□□□□ -0.3
SNF8-206ENST00000509989 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 SPRY4Q9C004 299 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 ZNF768Q9H5H4 540 aaKnown RBP13.18□□□□□ -0.3
SNF8-206ENST00000509989 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 GRHL1Q9NZI5 618 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 EPHA6Q9UF33 1036 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 ASF1AQ9Y294 204 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 TDRKHQ9Y2W6 561 aaKnown RBP13.18□□□□□ -0.3
SNF8-206ENST00000509989 PCDHGA7Q9Y5G6 932 aa13.18□□□□□ -0.3
SNF8-206ENST00000509989 LOC400499M0QZD8 3231 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 IGSF10Q6WRI0 2623 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 KLHL33A6NCF5 533 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 IFRD1O00458 451 aaPredicted RBP13.17□□□□□ -0.3
SNF8-206ENST00000509989 NVLO15381 856 aaKnown RBP13.17□□□□□ -0.3
SNF8-206ENST00000509989 HCRTR1O43613 425 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 RASSF9O75901 435 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 ANKRD34CP0C6C1 535 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 EBLN1P0CF75 366 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 PGAM1P18669 254 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 OGNP20774 298 aaKnown RBP13.17□□□□□ -0.3
SNF8-206ENST00000509989 BDKRB1P46663 353 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 KRT33BQ14525 404 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 LONRF1Q17RB8 773 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 ACSBG2Q5FVE4 666 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 AARS2Q5JTZ9 985 aaKnown RBP13.17□□□□□ -0.3
SNF8-206ENST00000509989 UNC5AQ6ZN44 842 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNF8-206ENST00000509989 ACVR1CQ8NER5 493 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 FLVCR1-AS1Q8TAF5 88 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 KLHL6Q8WZ60 621 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 TMEM159Q96B96 161 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 SNF8Q96H20 258 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 DPYSL5Q9BPU6 564 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 RAB33BQ9H082 229 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 VPS37BQ9H9H4 285 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 TEX264Q9Y6I9 313 aa13.17□□□□□ -0.3
SNF8-206ENST00000509989 MAGEB16A2A368 324 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 B4E171 279 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 QSOX1O00391 747 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 CTSBP07858 339 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 PKMP14618 531 aaKnown RBP13.16□□□□□ -0.3
SNF8-206ENST00000509989 TSPAN7P41732 249 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 FOXM1Q08050 763 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 CUL1Q13616 776 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 GBX1Q14549 363 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 GPR19Q15760 415 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 RBM20Q5T481 1227 aaKnown RBP13.16□□□□□ -0.3
SNF8-206ENST00000509989 PRAMEF17Q5VTA0 474 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 MRNIPQ6NTE8 343 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 SYDE1Q6ZW31 735 aaPredicted RBP13.16□□□□□ -0.3
SNF8-206ENST00000509989 TAX1BP1Q86VP1 789 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 KCNMB4Q86W47 210 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 LINC01555Q8NAE3 123 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 SIDT2Q8NBJ9 832 aaKnown RBP13.16□□□□□ -0.3
SNF8-206ENST00000509989 OR6C1Q96RD1 312 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 NDNQ99608 321 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 TTC1Q99614 292 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 SRMSQ9H3Y6 488 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 TFB2MQ9H5Q4 396 aaKnown RBP13.16□□□□□ -0.3
SNF8-206ENST00000509989 MVB12BQ9H7P6 319 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 RNF14Q9UBS8 474 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 FBXO5Q9UKT4 447 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 LHX6Q9UPM6 363 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 COLEC10Q9Y6Z7 277 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 HEATR5BQ9P2D3 2071 aa13.16□□□□□ -0.3
SNF8-206ENST00000509989 GSAPA4D1B5 854 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 SLC9B1P1A6NJY1 282 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 RRP8O43159 456 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 GSTM1P09488 218 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 ST6GAL1P15907 406 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 NELFEP18615 380 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 PAMP19021 973 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 NDUFS1P28331 727 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 CLCN7P51798 805 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 YBX1P67809 324 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 GSTM4Q03013 218 aa13.15□□□□□ -0.3
SNF8-206ENST00000509989 PDIA2Q13087 525 aaKnown RBP13.15□□□□□ -0.3
SNF8-206ENST00000509989 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms