RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 HDAC11Q96DB2 347 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 AHCYL2Q96HN2 611 aaKnown RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 CELF6Q96J87 481 aaKnown RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 ZNF641Q96N77 438 aaPredicted RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 FAM111AQ96PZ2 611 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 VAT1Q99536 393 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 TRIM56Q9BRZ2 755 aaKnown RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 ZPBPQ9BS86 351 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 NAT9Q9BTE0 207 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 SPRY4Q9C004 299 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 VPS11Q9H270 941 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 TRIT1Q9H3H1 467 aaKnown RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 MANSC1Q9H8J5 431 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 UGT1A7Q9HAW7 530 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 UGT1A10Q9HAW8 530 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 UGT1A8Q9HAW9 530 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 SLC40A1Q9NP59 571 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 SLCO1B3Q9NPD5 702 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 SMYD2Q9NRG4 433 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 PCMTD2Q9NV79 361 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 SYBUQ9NX95 663 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 BFARQ9NZS9 450 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 TMEM9Q9P0T7 183 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 LHX3Q9UBR4 397 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 UBA2Q9UBT2 640 aaPredicted RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 MRPS18BQ9Y676 258 aaKnown RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 KCNMB2Q9Y691 235 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 USH1CQ9Y6N9 552 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 KIF26BQ2KJY2 2108 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 TRPM6Q9BX84 2022 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 SPTAN1Q13813 2472 aaKnown RBP5.99□□□□□ -1.45
SSBP2-211ENST00000509013 NBASA2RRP1 2371 aa5.99□□□□□ -1.45
SSBP2-211ENST00000509013 CENPEQ02224 2701 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ARHGAP42A6NI28 874 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 A8MU76 341 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 A8MX80 341 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 POLR1CO15160 346 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 FGF10O15520 208 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SEMA7AO75326 666 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 DCTN3O75935 186 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 WFS1O76024 890 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 STK17BO94768 372 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 AP2A1O95782 977 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 FUCA1P04066 466 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CEACAM5P06731 702 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 MYCLP1P12525 358 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NFKB1P19838 968 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 BGNP21810 368 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SERPINA4P29622 427 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CCNFP41002 786 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 STAT5AP42229 794 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 GNPDA1P46926 289 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SERPINB4P48594 390 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NPY2RP49146 381 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 YBEYP58557 167 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 POLR2LP62875 67 aaKnown RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 PDE1BQ01064 536 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CTBSQ01459 385 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 RALGDSQ12967 914 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NAB1Q13506 487 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CRYMQ14894 314 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ACOX1Q15067 660 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 TEX44Q53QW1 395 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SPANXN3Q5MJ09 141 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 AFMIDQ63HM1 303 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CES3Q6UWW8 571 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 PACS1Q6VY07 963 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 MARK2Q7KZI7 788 aaKnown RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 OTOAQ7RTW8 1153 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ARHGAP22Q7Z5H3 698 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ZSWIM9Q86XI8 627 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CNPY4Q8N129 248 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NDUFAF2Q8N183 169 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 PELI3Q8N2H9 469 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ATPAF2Q8N5M1 289 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NPWQ8N729 165 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 RTL3Q8N8U3 475 aaKnown RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 GALNT11Q8NCW6 608 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 PPP1R14CQ8TAE6 165 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CPT1CQ8TCG5 803 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ZNF669Q96BR6 464 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 RMDN2Q96LZ7 410 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 TUBGCP5Q96RT8 1024 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SRPK1Q96SB4 655 aaKnown RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SLC38A3Q99624 504 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 TSSK1BQ9BXA7 367 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 GBA3Q9H227 469 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NOL6Q9H6R4 1146 aaKnown RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 ATP13A3Q9H7F0 1226 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 LRRC40Q9H9A6 602 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 SP110Q9HB58 689 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 PLAC1Q9HBJ0 212 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 APMAPQ9HDC9 416 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 NPHS2Q9NP85 383 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 FBXO8Q9NRD0 319 aa5.98□□□□□ -1.45
SSBP2-211ENST00000509013 PHPT1Q9NRX4 125 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 CUEDC1Q9NWM3 386 aaPredicted RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 TRNAU1APQ9NX07 287 aaKnown RBP5.98□□□□□ -1.45
SSBP2-211ENST00000509013 UBP1Q9NZI7 540 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms