RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 HOXD12P35452 270 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 DPP6P42658 865 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 ACADSBP45954 432 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 TPMTP51580 245 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SGSHP51688 502 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 YWHAZP63104 245 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 UBXN1Q04323 297 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF33AQ06730 810 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SRSF4Q08170 494 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 EIF4EBP2Q13542 120 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 STARD3Q14849 445 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 DRAP1Q14919 205 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 CLCA4Q14CN2 919 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SYCP1Q15431 976 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 DUOXA1Q1HG43 343 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 FUT11Q495W5 492 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 HSP90AA4PQ58FG1 418 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM133BQ5BKY9 247 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 N4BP2L1Q5TBK1 243 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SYPL2Q5VXT5 272 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 NUGGCQ68CJ6 796 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 DENND2CQ68D51 928 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 RFWD3Q6PCD5 774 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 TMEM65Q6PI78 240 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 KIAA1324Q6UXG2 1013 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC36A4Q6YBV0 504 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 IRF2BP2Q7Z5L9 587 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 TMEM110Q86TL2 294 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 TAC4Q86UU9 113 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 UNC45BQ8IWX7 931 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 FAM71DQ8N9W8 422 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SEMA6DQ8NFY4 1073 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 CEP76Q8TAP6 659 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 WFDC5Q8TCV5 224 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 DQX1Q8TE96 717 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 WFIKKN2Q8TEU8 576 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 UCMAQ8WVF2 138 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 GOLGA1Q92805 767 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC39A13Q96H72 371 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF419Q96HQ0 510 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 RITA1Q96K30 269 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 LMLNQ96KR4 655 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 C5orf34Q96MH7 638 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 PRICKLE1Q96MT3 831 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SERPINB11Q96P15 392 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 EDEM2Q9BV94 578 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 EDEM3Q9BZQ6 932 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 GANQ9H2C0 597 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 TMEM245Q9H330 911 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 EPS8L2Q9H6S3 715 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 SAP30LQ9HAJ7 183 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 PRDM16Q9HAZ2 1276 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 ARFGAP3Q9NP61 516 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 CD93Q9NPY3 652 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 ITM2CQ9NQX7 267 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 TAB2Q9NYJ8 693 aa3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 WSB2Q9NYS7 404 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 XPO7Q9UIA9 1087 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-226ENST00000508635 GVINP1Q7Z2Y8 2422 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 GPR179Q6PRD1 2367 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 PTPRZ1P23471 2315 aaPredicted RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 GON4LQ3T8J9 2241 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 NUP205Q92621 2012 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 WIPF3A6NGB9 483 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 KCNU1A8MYU2 1149 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 POC1B-GALNT4F8VUJ3 575 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 H7C1Q1 480 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 CLIC1O00299 241 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 CAPN9O14815 690 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 EPHB6O15197 1021 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 HSF2BPO75031 334 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 LUC7L3O95232 432 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 TRUB2O95900 331 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 MOCS2O96007 188 aaPredicted RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 ATP5BP06576 529 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 CEACAM1P13688 526 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 HLA-EP13747 358 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 CYP11B1P15538 503 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 CHRNB2P17787 502 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 CSRP1P21291 193 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 OXTRP30559 389 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 USP8P40818 1118 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 GABRB2P47870 512 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 KLK7P49862 253 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 NOVA1P51513 510 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 C21orf58P58505 322 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 RPS24P62847 133 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 TUBA4AP68366 448 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 PITX1P78337 314 aaPredicted RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 TXNL4AP83876 142 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 SHC2P98077 582 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 GFPT1Q06210 699 aaPredicted RBP3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 PDCLQ13371 301 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 ATP1A4Q13733 1029 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 MFSD13AQ14CX5 517 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 ACOX1Q15067 660 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 E2F5Q15329 346 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 TAF5Q15542 800 aa3.55□□□□□ -1.84
UBE2D3-226ENST00000508635 MAPKAPK3Q16644 382 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms