RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CASS4Q9NQ75 786 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM114A2Q9NRY5 505 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 CCM2LQ9NUG4 571 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 POLR3BQ9NW08 1133 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 SERGEFQ9UGK8 458 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 MAGEL2Q9UJ55 1249 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 RAB23Q9ULC3 237 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 PKP3Q9Y446 797 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA5Q9Y5G8 931 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM186AA6NE01 2351 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 RALGAPA1Q6GYQ0 2036 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 OTOGLQ3ZCN5 2332 aa5.45□□□□□ -1.54
HMGB1P44-201ENST00000508597 EP300Q09472 2414 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 C1orf232A0A0U1RR37 186 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 NPIPB15A6NHN6 443 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 SDR42E2A6NKP2 422 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 MEI4A8MW99 385 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 H7C0S8 307 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 STX7O15400 261 aaKnown RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GJB3O75712 270 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 SLU7O95391 586 aaKnown RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 TTC4O95801 387 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 HOXC4P09017 264 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 C6P13671 934 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GNSP15586 552 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 TSHRP16473 764 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 LPOP22079 712 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 HNRNPA2B1P22626 353 aaKnown RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 PTPRZ1P23471 2315 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CD27P26842 260 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 AKT2P31751 481 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CSF2RBP32927 897 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 MAGEA3P43357 314 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 PXNP49023 591 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 SPINT3P49223 89 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 VPS41P49754 854 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 STC1P52823 247 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 METAP1P53582 386 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ARL4CP56559 192 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 SCAND1P57086 179 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 YPEL5P62699 121 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 DMWDQ09019 674 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ILF2Q12905 390 aaKnown RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 RALGDSQ12967 914 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 MSLNQ13421 630 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CUL1Q13616 776 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GALNT3Q14435 633 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 TRIP13Q15645 432 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CNGA3Q16281 694 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CDKN3Q16667 212 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZNF284Q2VY69 593 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 POM121L1PQ3SYA9 428 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAXCQ5TGI0 409 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 IZUMO3Q5VZ72 239 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 LYSMD4Q5XG99 296 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 LRRC66Q68CR7 880 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CRTC1Q6UUV9 634 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 LARP4Q71RC2 724 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GLT6D1Q7Z4J2 308 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 TECPR1Q7Z6L1 1165 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM124AQ86V42 546 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CACUL1Q86Y37 369 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 LMNTD2Q8IXW0 634 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 IFT20Q8IY31 132 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CNPY4Q8N129 248 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 PPHLN1Q8NEY8 458 aaKnown RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 OR52K1Q8NGK4 314 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GABPB2Q8TAK5 448 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 RLN3Q8WXF3 142 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 DTD2Q96FN9 168 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 COQ10AQ96MF6 247 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 PLEKHG4BQ96PX9 1271 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 LRRC1Q9BTT6 524 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 KIFC1Q9BW19 673 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 BTBD2Q9BX70 525 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GPR63Q9BZJ6 419 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM83DQ9H4H8 585 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 AASDHPPTQ9NRN7 309 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 IL17CQ9P0M4 197 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 FTSJ1Q9UET6 329 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ANAPC5Q9UJX4 755 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 APPL1Q9UKG1 709 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 CDC42EP3Q9UKI2 254 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZNF711Q9Y462 761 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 GPR179Q6PRD1 2367 aa5.44□□□□□ -1.54
HMGB1P44-201ENST00000508597 PLXNA2O75051 1894 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 A0A1B0GTW7 788 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM237BA0A1B0GVD1 139 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 IGLON5A6NGN9 336 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM47DPA6NHR8 397 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 E7ESA3 106 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 PROB1E7EW31 1015 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 PLK4O00444 970 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 FPGTO14772 594 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 DFNA5O60443 496 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 LRP3O75074 770 aa5.43□□□□□ -1.54
HMGB1P44-201ENST00000508597 RECQL5O94762 991 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms