RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 UMODP07911 640 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 PVRP15151 417 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 MMP11P24347 488 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 KDELR1P24390 212 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 AKT1P31749 480 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 DEKP35659 375 aaKnown RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 GJC1P36383 396 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 GABRA4P48169 554 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 OTUD4Q01804 1114 aaKnown RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 CDC16Q13042 620 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 PDK1Q15118 436 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 TLR1Q15399 786 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 TEX44Q53QW1 395 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 FAM182AQ5T1J6 154 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 AGAP7PQ5VUJ5 663 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 PRAMEF13Q5VWM6 474 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 SLC9A4Q6AI14 798 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 FAM180AQ6UWF9 173 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 BNC2Q6ZN30 1099 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 VSIG1Q86XK7 387 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 BCORP1Q8N888 145 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 HM13Q8TCT9 377 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF398Q8TD17 642 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 ITLN2Q8WWU7 325 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 AGAP4Q96P64 663 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 OLFM3Q96PB7 478 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 TRIM56Q9BRZ2 755 aaKnown RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 TFB2MQ9H5Q4 396 aaKnown RBP9.07□□□□□ -0.96
NEDD9-211ENST00000508546 FAM60AQ9NP50 221 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 SLC6A20Q9NP91 592 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 CHST11Q9NPF2 352 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 ANO10Q9NW15 660 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 CDYLQ9Y232 598 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 PKP3Q9Y446 797 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 HEY1Q9Y5J3 304 aa9.07□□□□□ -0.96
NEDD9-211ENST00000508546 C17orf113A0A1B0GUU1 675 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 PPP1R12AO14974 1030 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 SGTAO43765 313 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 PRICKLE3O43900 615 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 JRKO75564 520 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 FAM155BO75949 473 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 PROSCO94903 275 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 POLBP06746 335 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 WNT3AP56704 352 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 TAS2R40P59535 323 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 NOMO1Q15155 1222 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF630Q2M218 657 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 NKAIN1Q4KMZ8 207 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 SIRPB2Q5JXA9 342 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 C1orf189Q5VU69 101 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 IRAK1BP1Q5VVH5 260 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF324BQ6AW86 544 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 TLDC1Q6P9B6 456 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 SARM1Q6SZW1 724 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 SPESP1Q6UW49 350 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 KDELC1Q6UW63 502 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 DET1Q7L5Y6 550 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 AMIGO1Q86WK6 493 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 GAS2L3Q86XJ1 694 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 CPNE8Q86YQ8 564 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 CFAP206Q8IYR0 622 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 ADGRF3Q8IZF5 1079 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 NXPE1Q8N323 547 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF808Q8N4W9 903 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 LILRA3Q8N6C8 439 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 C19orf47Q8N9M1 422 aaKnown RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 N4BP2L2Q92802 583 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 TEKT5Q96M29 485 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 FERD3LQ96RJ6 166 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 KLHL25Q9H0H3 589 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 TSPY26PQ9H489 355 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 EPS8L2Q9H6S3 715 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 TXLNGQ9NUQ3 528 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 OLAHQ9NV23 265 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 ACTR10Q9NZ32 417 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 DHCR7Q9UBM7 475 aaKnown RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 FAM153AQ9UHL3 310 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 FBXL4Q9UKA2 621 aa9.06□□□□□ -0.96
NEDD9-211ENST00000508546 BZW2Q9Y6E2 419 aaKnown RBP9.06□□□□□ -0.96
NEDD9-211ENST00000508546 CCDC78A2IDD5 438 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 AGAP14A8MT82 685 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 PCDH17O14917 1159 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 ZSCAN9O15535 394 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-211ENST00000508546 PRAMEF1O95521 474 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 ONECUT2O95948 504 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 ALBP02768 609 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 PTPN3P26045 913 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 HTR1EP28566 365 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-211ENST00000508546 CD151P48509 253 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 PRLHRP49683 370 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 TDGF1P3P51864 188 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 FOXL2P58012 376 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 SRSF11Q05519 484 aaKnown RBP9.05□□□□□ -0.96
NEDD9-211ENST00000508546 SLC1A5Q15758 541 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms