RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 RAPGEF5Q92565 580 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 IQCDQ96DY2 449 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 BMFQ96LC9 184 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 GDAP1L1Q96MZ0 367 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SMIM14Q96QK8 99 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CALN1Q9BXU9 219 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SLC17A9Q9BYT1 436 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 SLC32A1Q9H598 525 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 RETREG1Q9H6L5 497 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PDFQ9HBH1 243 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 NOD2Q9HC29 1040 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CPNE5Q9HCH3 593 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 PREBQ9HCU5 417 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 IPO11Q9UI26 975 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 FADS3Q9Y5Q0 445 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 NCOR2Q9Y618 2525 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 TNRC6BQ9UPQ9 1833 aaKnown RBP4.55□□□□□ -1.68
NUP54-206ENST00000508465 PCNX2A6NKB5 2137 aa4.55□□□□□ -1.68
NUP54-206ENST00000508465 CACNA1EQ15878 2313 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 PRAMEF26H0Y7S4 382 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 SCAMP1O15126 338 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 SLC7A4O43246 635 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 KDM1AO60341 852 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 CBFA2T3O75081 653 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 ERN1O75460 977 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 CER1O95813 267 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 GSRP00390 522 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 CELA2AP08217 269 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 THEGLP0DJG4 465 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 MYCLP1P12525 358 aaPredicted RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 POU3F2P20265 443 aaPredicted RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 CSRP1P21291 193 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 GCSHP23434 173 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 KDELR1P24390 212 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 AKT2P31751 481 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 HTR7P34969 479 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 FOLR3P41439 243 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NEK3P51956 506 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 VAV2P52735 878 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 LGALS4P56470 323 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 CLDN6P56747 220 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NXPH1P58417 271 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 MAXP61244 160 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 RPS21P63220 83 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 GBE1Q04446 702 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 RAD51Q06609 339 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 IL10RBQ08334 325 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 ITKQ08881 620 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 CCDC15Q0P6D6 951 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 SLC14A1Q13336 389 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 TRIM14Q14142 442 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 DPYSL3Q14195 570 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 IHHQ14623 411 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 DPYSL2Q16555 572 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 HADHQ16836 314 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 SETMARQ53H47 684 aaPredicted RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 ANKRD20A8PQ5CZ79 823 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 TPRG1LQ5T0D9 272 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NAPEPLDQ6IQ20 393 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 SARM1Q6SZW1 724 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 IL27RAQ6UWB1 636 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NPNTQ6UXI9 565 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 GCNT7Q6ZNI0 430 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 TRIM69Q86WT6 500 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 SLC25A45Q8N413 288 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 PQLC3Q8N755 202 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NIPA2Q8N8Q9 360 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 PDCD6IPQ8WUM4 868 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 CHAC2Q8WUX2 184 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 TEKT4Q8WW24 435 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 FAM131CQ96AQ9 280 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 SKA1Q96BD8 255 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NACC2Q96BF6 587 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 MFSD3Q96ES6 412 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 PPP1R16AQ96I34 528 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 KLF6Q99612 283 aaPredicted RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 MRI1Q9BV20 369 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 CINPQ9BW66 212 aaPredicted RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 GOLPH3Q9H4A6 298 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 UNKLQ9H9P5 680 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 BCO1Q9HAY6 547 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 NT5MQ9NPB1 228 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 GDF3Q9NR23 364 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 MBNL1Q9NR56 388 aaKnown RBP4.54□□□□□ -1.68
NUP54-206ENST00000508465 DONSONQ9NYP3 566 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 MOCS1Q9NZB8 636 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 FAM30AQ9NZY2 134 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 UVRAGQ9P2Y5 699 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 PCDHA13Q9Y5I0 950 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 HEY1Q9Y5J3 304 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 ENTPD2Q9Y5L3 495 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 WDFY3Q8IZQ1 3526 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 BPTFQ12830 3046 aa4.54□□□□□ -1.68
NUP54-206ENST00000508465 CACNA1AO00555 2505 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CFAP47Q6ZTR5 3102 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 CABIN1Q9Y6J0 2220 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 PCDH15Q96QU1 1955 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 ASPMQ8IZT6 3477 aa4.53□□□□□ -1.68
NUP54-206ENST00000508465 A0A0U1RQJ8 604 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms