RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 PMS2CLQ68D20 193 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 FRA10AC1Q70Z53 315 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 PIM3Q86V86 326 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 TRIM48Q8IWZ4 208 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 MFSD2AQ8NA29 543 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 ASZ1Q8WWH4 475 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 VPS35Q96QK1 796 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 DPEP2Q9H4A9 486 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 SPATS2LQ9NUQ6 558 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 CPSF2Q9P2I0 782 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 APOBEC3BQ9UH17 382 aaKnown RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 PRSS21Q9Y6M0 314 aa10.78□□□□□ -0.68
PROM1-207ENST00000508167 EP300Q09472 2414 aaPredicted RBP10.78□□□□□ -0.68
PROM1-207ENST00000508167 H3BM21 787 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.68
PROM1-207ENST00000508167 KMOO15229 486 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 MTHFD2P13995 350 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 RPL10P27635 214 aaKnown RBP10.77□□□□□ -0.68
PROM1-207ENST00000508167 ARL1P40616 181 aaPredicted RBP10.77□□□□□ -0.68
PROM1-207ENST00000508167 DPP6P42658 865 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 POU4F1Q01851 419 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 TRIM61Q5EBN2 209 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 GCNT7Q6ZNI0 430 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 FRMD7Q6ZUT3 714 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 ADGRG6Q86SQ4 1221 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 TEX9Q8N6V9 391 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 CCDC97Q96F63 343 aaPredicted RBP10.77□□□□□ -0.68
PROM1-207ENST00000508167 OR2M4Q96R27 311 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 CCM2Q9BSQ5 444 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 FGF22Q9HCT0 170 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 SLC7A8Q9UHI5 535 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 BAIAP2L1Q9UHR4 511 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 TAGLN3Q9UI15 199 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 C15orf41Q9Y2V0 281 aa10.77□□□□□ -0.68
PROM1-207ENST00000508167 TMEM233B4DJY2 109 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 KPNA5O15131 536 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 ANP32DO95626 131 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 IDSP22304 550 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 GLRBP48167 497 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 IL2P60568 153 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 RCN2Q14257 317 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 KPNB1Q14974 876 aaKnown RBP10.77□□□□□ -0.69
PROM1-207ENST00000508167 UGT3A2Q3SY77 523 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 CHSY3Q70JA7 882 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 NLRP8Q86W28 1048 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 PARGQ86W56 976 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 SYT12Q8IV01 421 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 MAML2Q8IZL2 1156 aaPredicted RBP10.77□□□□□ -0.69
PROM1-207ENST00000508167 MYO1HQ8N1T3 1032 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 LMX1AQ8TE12 382 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 AARSD1Q9BTE6 412 aaKnown RBP10.77□□□□□ -0.69
PROM1-207ENST00000508167 NUSAP1Q9BXS6 441 aaKnown RBP10.77□□□□□ -0.69
PROM1-207ENST00000508167 GSTO2Q9H4Y5 243 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 NFKBIL1Q9UBC1 381 aaPredicted RBP10.77□□□□□ -0.69
PROM1-207ENST00000508167 PRSS38A1L453 326 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 NEMP2A6NFY4 417 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 SLC35G4P0C7Q5 338 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 HALP42357 657 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 ALDH18A1P54886 795 aaKnown RBP10.77□□□□□ -0.69
PROM1-207ENST00000508167 ABRQ12979 859 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 PRR23CQ6ZRP0 262 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 ISCA2Q86U28 154 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 KBTBD2Q8IY47 623 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 ZBTB2Q8N680 514 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 PDXPQ96GD0 296 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 C19orf43Q9BQ61 176 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 TEX101Q9BY14 249 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 ARRDC1-AS1Q9H2J1 176 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 FAM86C1Q9NVL1 165 aa10.77□□□□□ -0.69
PROM1-207ENST00000508167 TRIM13O60858 407 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 TSPAN12O95859 305 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 CCDC166P0CW27 439 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 DGKAP23743 735 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 MAP4P27816 1152 aaKnown RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 CRABP2P29373 138 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 RPS27LQ71UM5 84 aaKnown RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 MYLK4Q86YV6 388 aaPredicted RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 CPNE9Q8IYJ1 553 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 FAM46DQ8NEK8 389 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 PPP1R14CQ8TAE6 165 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 RAB3IPQ96QF0 476 aaPredicted RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 SMOXQ9NWM0 555 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 UTP6Q9NYH9 597 aaKnown RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 CORO1CQ9ULV4 474 aaPredicted RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 LRRC42Q9Y546 428 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 USP34Q70CQ2 3546 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 COL4A2P08572 1712 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 CCDC189A1A4V9 331 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 AP2A2O94973 939 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 ITGAXP20702 1163 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 TRIM23P36406 574 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 NFKB2Q00653 900 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 ILF2Q12905 390 aaKnown RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 FAM83EQ2M2I3 478 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 DCP2Q8IU60 420 aaKnown RBP10.76□□□□□ -0.69
PROM1-207ENST00000508167 PHACTR4Q8IZ21 702 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 OR1E3Q8WZA6 343 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 LINGO1Q96FE5 620 aa10.76□□□□□ -0.69
PROM1-207ENST00000508167 BIRC8Q96P09 236 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms