RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 AHCYL2Q96HN2 611 aaKnown RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 RAB11FIP5Q9BXF6 653 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 CAAP1Q9H8G2 361 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 SLC40A1Q9NP59 571 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 SNX15Q9NRS6 342 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 SCHIP1Q9P0W5 487 aaPredicted RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 ZNF624Q9P2J8 865 aaPredicted RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 GALPQ9UBC7 116 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 PCDHGA1Q9Y5H4 931 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 PIKFYVEQ9Y2I7 2098 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 EP300Q09472 2414 aaPredicted RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 GOLGA6L10A6NI86 522 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 ZNF839A8K0R7 811 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 CBFA2T3O75081 653 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 MATN4O95460 622 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 MT-ND3P03897 115 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 COL6A2P12110 1019 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 HSD17B2P37059 387 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 EPHA4P54764 986 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 GPLD1P80108 840 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 TMEM26Q6ZUK4 368 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 EFL1Q7Z2Z2 1120 aaKnown RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 LCA5Q86VQ0 697 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 VRK3Q8IV63 474 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 GIMAP7Q8NHV1 300 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 BAHD1Q8TBE0 780 aaPredicted RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 IFI44Q8TCB0 444 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 PATE1Q8WXA2 126 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 ISL2Q96A47 359 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 SLC30A3Q99726 388 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 DPYSL5Q9BPU6 564 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 DERL2Q9GZP9 239 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 ABCG4Q9H172 646 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 KIR3DX1Q9H7L2 352 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 CAB39LQ9H9S4 337 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 NMRAL1Q9HBL8 299 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 TBK1Q9UHD2 729 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 LNPEPQ9UIQ6 1025 aa19.57■□□□□ 0.72
USP53-203ENST00000507597 APOBEC2Q9Y235 224 aaKnown RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 CFAP20Q9Y6A4 193 aaKnown RBP19.57■□□□□ 0.72
USP53-203ENST00000507597 MYO15AQ9UKN7 3530 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 A0A096LPK6 155 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 FAM221BA6H8Z2 402 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 LILRA5A6NI73 299 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 PSIP1O75475 530 aaKnown RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 C2P06681 752 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 ENO2P09104 434 aaPredicted RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 LTA4HP09960 611 aaKnown RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 CCDC166P0CW27 439 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 AMD1P17707 334 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 TIAL1Q01085 375 aaKnown RBP eCLIP19.56■□□□□ 0.72
USP53-203ENST00000507597 CLPPQ16740 277 aaPredicted RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 UBE2R2Q712K3 238 aaPredicted RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 HDXQ7Z353 690 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 CEP97Q8IW35 865 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 FBXO15Q8NCQ5 510 aaPredicted RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 OR10G6Q8NH81 332 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 ASB11Q8WXH4 323 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 STMN4Q9H169 189 aaPredicted RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 KCNK4Q9NYG8 393 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 CTNNAL1Q9UBT7 734 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 TDRKHQ9Y2W6 561 aaKnown RBP19.56■□□□□ 0.72
USP53-203ENST00000507597 RNF215Q9Y6U7 377 aa19.56■□□□□ 0.72
USP53-203ENST00000507597 PIEZO1Q92508 2521 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 UQCRHLA0A096LP55 91 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 SMIM23A6NLE4 172 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 PHGDHO43175 533 aaKnown RBP19.55■□□□□ 0.72
USP53-203ENST00000507597 C1orf105O95561 183 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 UQCRHP07919 91 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 MYZAPP0CAP1 466 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 GCAP28676 217 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 SLCO1A2P46721 670 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 NR1D2Q14995 579 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 RSPO4Q2I0M5 234 aaPredicted RBP19.55■□□□□ 0.72
USP53-203ENST00000507597 TSNAXIP1Q2TAA8 658 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 KRT71Q3SY84 523 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 XKR5Q6UX68 686 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 CYHR1Q6ZMK1 362 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 ZNF438Q7Z4V0 828 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 ADAMTSL2Q86TH1 951 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 IQCKQ8N0W5 287 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 DEFB124Q8NES8 71 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 CAMK1GQ96NX5 476 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 VPS11Q9H270 941 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 TFB2MQ9H5Q4 396 aaKnown RBP19.55■□□□□ 0.72
USP53-203ENST00000507597 PARVBQ9HBI1 364 aa19.55■□□□□ 0.72
USP53-203ENST00000507597 NOVA2Q9UNW9 492 aaKnown RBP19.55■□□□□ 0.72
USP53-203ENST00000507597 COL5A1P20908 1838 aaPredicted RBP19.55■□□□□ 0.72
USP53-203ENST00000507597 RIF1Q5UIP0 2472 aaKnown RBP19.54■□□□□ 0.72
USP53-203ENST00000507597 DMDP11532 3685 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 FAM186AA6NE01 2351 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 GFYI3L273 518 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 MATN2O00339 956 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 TM4SF5O14894 197 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 PPM1DO15297 605 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 DUX1O43812 170 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 RFPL3O75679 317 aa19.54■□□□□ 0.72
USP53-203ENST00000507597 H2AFXP16104 143 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms