RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TCP10LQ8TDR4 215 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 SAP25Q8TEE9 199 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ZDHHC1Q8WTX9 485 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 TFGQ92734 400 aaPredicted RBP13.84□□□□□ -0.19
RNF4-208ENST00000507247 KIAA1191Q96A73 305 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 SCYL1Q96KG9 808 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 TSNARE1Q96NA8 513 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ATOH8Q96SQ7 321 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 TFB2MQ9H5Q4 396 aaKnown RBP13.84□□□□□ -0.19
RNF4-208ENST00000507247 MED4Q9NPJ6 270 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ZNF624Q9P2J8 865 aaPredicted RBP13.84□□□□□ -0.19
RNF4-208ENST00000507247 XPR1Q9UBH6 696 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 PLLPQ9Y342 182 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 CSNK1G3Q9Y6M4 447 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ZFHX2Q9C0A1 2572 aaPredicted RBP13.84□□□□□ -0.19
RNF4-208ENST00000507247 VPS13AQ96RL7 3174 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 B4DGG1 531 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 IFRD1O00458 451 aaPredicted RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 YKT6O15498 198 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 FFAR2O15552 330 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 PRPF4O43172 522 aaKnown RBP eCLIP13.83□□□□□ -0.2
RNF4-208ENST00000507247 PLIN3O60664 434 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 C1orf105O95561 183 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 PROCP04070 461 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 C8GP07360 202 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 ANXA6P08133 673 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 HPDP32754 393 aaPredicted RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 RPA3P35244 121 aaPredicted RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 SLC19A1P41440 591 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 HALP42357 657 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 SP140Q13342 867 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 PPP1R3AQ16821 1122 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 CCSMST1Q4G0I0 132 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 HSP90B2PQ58FF3 399 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 KLC3Q6P597 504 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 IYDQ6PHW0 289 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 UNC5DQ6UXZ4 953 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 UBE2R2Q712K3 238 aaPredicted RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 ADAMTSL2Q86TH1 951 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 OR5AR1Q8NGP9 310 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 SLC12A9Q9BXP2 914 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 PARD6AQ9NPB6 346 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 KCNK9Q9NPC2 374 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 IMP3Q9NV31 184 aaKnown RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 NCDNQ9UBB6 729 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 GRID1Q9ULK0 1009 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 DOLKQ9UPQ8 538 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 PDE10AQ9Y233 779 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 ASF1AQ9Y294 204 aa13.83□□□□□ -0.2
RNF4-208ENST00000507247 ARID1BQ8NFD5 2236 aaPredicted RBP13.83□□□□□ -0.2
RNF4-208ENST00000507247 CABIN1Q9Y6J0 2220 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 SLC16A5O15375 505 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 NOBOXO60393 691 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 KERAO60938 352 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 RBP1P09455 135 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 MTHFD1P11586 935 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 ETV4P43268 484 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 KPNA2P52292 529 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 MBOAT1Q6ZNC8 495 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 SFRP1Q8N474 314 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 RHEBL1Q8TAI7 183 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 STAG3L4Q8TBR4 150 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 SLC37A2Q8TED4 501 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 EXT2Q93063 718 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 FAM111AQ96PZ2 611 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 MRPL57Q9BQC6 102 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 SELENOSQ9BQE4 189 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 IQCGQ9H095 443 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 MRPL46Q9H2W6 279 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 RXFP3Q9NSD7 469 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 SEMA4GQ9NTN9 838 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 UTP6Q9NYH9 597 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 SIRPGQ9P1W8 387 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 CPSF2Q9P2I0 782 aaKnown RBP13.82□□□□□ -0.2
RNF4-208ENST00000507247 CIDEBQ9UHD4 219 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 RNF112Q9ULX5 631 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 GPR179Q6PRD1 2367 aa13.82□□□□□ -0.2
RNF4-208ENST00000507247 KIR2DS5A0A0G2JLQ3 304 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 A0A0G2JNG1 304 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 KIR2DS3K7RE56 304 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 UBXN8O00124 270 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 CATP04040 527 aaKnown RBP13.81□□□□□ -0.2
RNF4-208ENST00000507247 TPBGLP0DKB5 382 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 MTHFD2P13995 350 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 CYP2A7P20853 494 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 TGM1P22735 817 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 MAPK9P45984 424 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 MAZP56270 477 aaKnown RBP13.81□□□□□ -0.2
RNF4-208ENST00000507247 UBE2IP63279 158 aaKnown RBP13.81□□□□□ -0.2
RNF4-208ENST00000507247 GPS2Q13227 327 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 PRKG2Q13237 762 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 GRB7Q14451 532 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 KIR2DS5Q14953 304 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 TGFBIQ15582 683 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 CCDC153Q494R4 210 aa13.81□□□□□ -0.2
RNF4-208ENST00000507247 C6orf132Q5T0Z8 1188 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms