RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ACVR1Q04771 509 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 SEMA5AQ13591 1074 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 RPS6KA1Q15418 735 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 GPR19Q15760 415 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 DNAJC21Q5F1R6 531 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 TSTD2Q5T7W7 516 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 PTRH1Q86Y79 214 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 PIANPQ8IYJ0 282 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 GPR135Q8IZ08 494 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 LILRA3Q8N6C8 439 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 CLDN19Q8N6F1 224 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 TEX19Q8NA77 164 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 OR52K1Q8NGK4 314 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 N4BP2L2Q92802 583 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 CLIP3Q96DZ5 547 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 TCTN2Q96GX1 697 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 DESI2Q9BSY9 194 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 NLNQ9BYT8 704 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 ACTR5Q9H9F9 607 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 ETNK1Q9HBU6 452 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 ZNF71Q9NQZ8 489 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 ACTR10Q9NZ32 417 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 PADI2Q9Y2J8 665 aa13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 FLNBO75369 2602 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-203ENST00000507004 CCDC78A2IDD5 438 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 C9J4A7 227 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 E7EQ34 232 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 BTN3A3O00478 584 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 BTN3A1O00481 513 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 ARHGAP6O43182 974 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 NRDCO43847 1150 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 KLHL41O60662 606 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 PDHA2P29803 388 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 CDKN1CP49918 316 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 ITGA1P56199 1179 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 CCNG2Q16589 344 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 FASTKD1Q53R41 847 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 ATP1A1-AS1Q5TC04 95 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 ARMC3Q5W041 872 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 DRICH1Q6PGQ1 229 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 SPESP1Q6UW49 350 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 ZNF662Q6ZS27 426 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 DSELQ8IZU8 1212 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 MPP5Q8N3R9 675 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 PPHLN1Q8NEY8 458 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 OR4L1Q8NH43 312 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 OR5K2Q8NHB8 316 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 DENND1AQ8TEH3 1009 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 ASZ1Q8WWH4 475 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 SLC22A18Q96BI1 424 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 IP6K3Q96PC2 410 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 TRAPPC9Q96Q05 1148 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 TRIM4Q9C037 500 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 EIF2B3Q9NR50 452 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 RAB6BQ9NRW1 208 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 HOMER3Q9NSC5 361 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 SNX7Q9UNH6 387 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 PCDHGA9Q9Y5G4 932 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 SEC16AO15027 2179 aa13.98□□□□□ -0.17
HMGCS1-203ENST00000507004 SLC5A10A0PJK1 596 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 CCDC162PA2VCL2 907 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 TMEM150CB9EJG8 249 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 KPNA5O15131 536 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 PFDN6O15212 129 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 FKBP9O95302 570 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 IGHEP01854 428 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ST6GAL1P15907 406 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ACADLP28330 430 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 RORAP35398 523 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ARCN1P48444 511 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 TTPAP49638 278 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 RRADP55042 308 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 GPS2Q13227 327 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 KIR2DS3Q14952 304 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 TMED2Q15363 201 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 PLEKHS1Q5SXH7 462 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ASB18Q6ZVZ8 466 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ATCAYQ86WG3 371 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ADGRF3Q8IZF5 1079 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 SPC24Q8NBT2 197 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 PHC3Q8NDX5 983 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 OR13J1Q8NGT2 312 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 OR6P1Q8NGX9 317 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 PROKR1Q8TCW9 393 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 HDAC10Q969S8 669 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 PANX3Q96QZ0 392 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 CARD6Q9BX69 1037 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 EPN3Q9H201 632 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 CHST8Q9H2A9 424 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 CASS4Q9NQ75 786 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 ACSS2Q9NR19 701 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 GUCA1BQ9UMX6 200 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 SRPK3Q9UPE1 567 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 DRG1Q9Y295 367 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 TP53TG5Q9Y2B4 290 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 TCAF1Q9Y4C2 921 aa13.97□□□□□ -0.17
HMGCS1-203ENST00000507004 TCRBV7S2A1N4TA0A589 114 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms