RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 IMPG1Q17R60 797 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 AASDHQ4L235 1098 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 RBM23Q86U06 439 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 L3MBTL4Q8NA19 623 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 RAB7BQ96AH8 199 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 ZNF514Q96K75 400 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 ACTR8Q9H981 624 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 GIMAP2Q9UG22 337 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 CD84Q9UIB8 345 aa16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 TSR3Q9UJK0 312 aaKnown RBP16.9■□□□□ 0.3
TRAPPC11-204ENST00000505676 KANSL1LA0AUZ9 987 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 H0YJX3 145 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 FXYD1O00168 92 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 MANBAO00462 879 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 MYOGP15173 224 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 MAP4P27816 1152 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 MAPK1P28482 360 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 ABRAXAS2Q15018 415 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 ACOX1Q15067 660 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 C18orf21Q32NC0 220 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 BCL7AQ4VC05 210 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 SYTL3Q4VX76 610 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 CYP20A1Q6UW02 462 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 RNF111Q6ZNA4 994 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 ADGRD2Q7Z7M1 963 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 ICA1LQ8NDH6 482 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 PROKR1Q8TCW9 393 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 SCAMP4Q969E2 229 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM159Q96B96 161 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 RSPRY1Q96DX4 576 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 CCM2Q9BSQ5 444 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 DNAJC11Q9NVH1 559 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 RIMS3Q9UJD0 308 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMED5Q9Y3A6 229 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 HEPACAM2A8MVW5 462 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 C1QTNF3-AMACRE9PGA6 284 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 KPNA3O00505 521 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 PSIP1O75475 530 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 RSL1D1O76021 490 aaKnown RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC6A2P23975 617 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 HTR6P50406 440 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 DPTQ07507 201 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 PCDH1Q08174 1060 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 INPP5AQ14642 412 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 TCEAL5Q5H9L2 206 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 LRRC73Q5JTD7 316 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 LCN8Q6JVE9 175 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMC5Q6UXY8 1006 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 C12orf40Q86WS4 652 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC15A3Q8IY34 581 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 KBTBD2Q8IY47 623 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 FBXO15Q8NCQ5 510 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 OR2T34Q8NGX1 318 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 OR2T3Q8NH03 318 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 SKA2Q8WVK7 121 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 FGF13Q92913 245 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 FOPNLQ96NB1 174 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 DYRK4Q9NR20 520 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 ACTR3BQ9P1U1 418 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 DTNAQ9Y4J8 743 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 AP4S1Q9Y587 144 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 PCDHA9Q9Y5H5 950 aa16.89■□□□□ 0.29
TRAPPC11-204ENST00000505676 MAGEA13PA6NCF6 341 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 SGTAO43765 313 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 CATP04040 527 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 VIPR2P41587 438 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 ZFP36L2P47974 494 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 NRIP1P48552 1158 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 NME5P56597 212 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 UFM1P61960 85 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 TLR1Q15399 786 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM52BQ4KMG9 183 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 C6orf10Q5SRN2 563 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 C9orf64Q5T6V5 341 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 IL23RQ5VWK5 629 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 FBXL19Q6PCT2 694 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 GPR149Q86SP6 731 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 AADATQ8N5Z0 425 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 RNF148Q8N7C7 305 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 METTL2AQ96IZ6 378 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 CCDC138Q96M89 665 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 UHRF1Q96T88 793 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 LRTM1Q9HBL6 345 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 C1orf109Q9NX04 203 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 PCDH10Q9P2E7 1040 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 KLQ9UEF7 1012 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 ZNF490Q9ULM2 529 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 FADS2P1A8MWK0 482 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 LOC730098B7Z3J9 87 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 PRPS2P11908 318 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 ERFP50548 548 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 MAP7Q14244 749 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 GAB4Q2WGN9 574 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 LIPJQ5W064 366 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 ANO7Q6IWH7 933 aa16.88■□□□□ 0.29
TRAPPC11-204ENST00000505676 SCIMPQ6UWF3 145 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms