RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 OR52E1Q8NGJ3 308 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 OR13C4Q8NGS5 318 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 OR8K5Q8NH50 307 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 FLVCR1-AS1Q8TAF5 88 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ZFPM2Q8WW38 1151 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 LCN9Q8WX39 176 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 SEC14L1Q92503 715 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 CPT1BQ92523 772 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 KRT35Q92764 455 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 P3H4Q92791 437 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 PNPLA2Q96AD5 504 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 IQCDQ96DY2 449 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 LINC00615Q96LM1 132 aaPredicted RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 QKIQ96PU8 341 aaKnown RBP eCLIP5.67□□□□□ -1.5
GYPB-205ENST00000505583 TRAPPC9Q96Q05 1148 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 FERD3LQ96RJ6 166 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 SMAD5Q99717 465 aaKnown RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 FAM118BQ9BPY3 351 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 HEMGNQ9BXL5 484 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 PITPNM3Q9BZ71 974 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 SPRTNQ9H040 489 aaPredicted RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 OR52A5Q9H2C5 316 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 DEF6Q9H4E7 631 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 COG4Q9H9E3 785 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ACTR5Q9H9F9 607 aaPredicted RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 NHEJ1Q9H9Q4 299 aaPredicted RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 SLAMF7Q9NQ25 335 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 C1GALT1Q9NS00 363 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ABHD10Q9NUJ1 306 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ASF1BQ9NVP2 202 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 DDX56Q9NY93 547 aaKnown RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 HACD3Q9P035 362 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 RSPH14Q9UHP6 348 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 LCMT1Q9UIC8 334 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ACSL5Q9ULC5 683 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ZNF451Q9Y4E5 1061 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 CSAG2Q9Y5P2 127 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 ALG6Q9Y672 507 aa5.67□□□□□ -1.5
GYPB-205ENST00000505583 MDC1Q14676 2089 aaKnown RBP5.67□□□□□ -1.5
GYPB-205ENST00000505583 DOCK10Q96BY6 2186 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 RNF223E7ERA6 249 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 LDB2O43679 373 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 SPOPO43791 374 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 PRMT3O60678 531 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 DPM1O60762 260 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 MFAP3LO75121 409 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ALOX12BO75342 701 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 LDLRP01130 860 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 MSL3P1P0C860 447 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 CYP2A7P20853 494 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 PSMB4P28070 264 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 GABRA4P48169 554 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 PRLHRP49683 370 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ZNF140P52738 457 aaPredicted RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 BOP1Q14137 746 aaKnown RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 KRT33BQ14525 404 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 SLC9A5Q14940 896 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 TAF1AQ15573 450 aaPredicted RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 KYNUQ16719 465 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 C4orf48Q5BLP8 95 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 TFDP3Q5H9I0 405 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 C1orf189Q5VU69 101 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 NAPRTQ6XQN6 538 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 MAMDC2Q7Z304 686 aaPredicted RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 PPP1R32Q7Z5V6 425 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 MRGPREQ86SM8 312 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 CCDC50Q8IVM0 306 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 RHOT2Q8IXI1 618 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 FAM20CQ8IXL6 584 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 KATNAL2Q8IYT4 538 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 CARFQ8N187 725 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 NXPE1Q8N323 547 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 TMEM102Q8N9M5 508 aaPredicted RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 LMNTD1Q8N9Z9 388 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ZNF511Q8NB15 262 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ACVR1CQ8NER5 493 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 HM13Q8TCT9 377 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 RBM41Q96IZ5 413 aaKnown RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 VAT1Q99536 393 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 MESP1Q9BRJ9 268 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 HGH1Q9BTY7 390 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 FSD1LQ9BXM9 530 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 GBA3Q9H227 469 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 SRMSQ9H3Y6 488 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 TFB2MQ9H5Q4 396 aaKnown RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 ZNF552Q9H707 407 aaPredicted RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 SLC22A11Q9NSA0 550 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 CUEDC1Q9NWM3 386 aaPredicted RBP5.66□□□□□ -1.5
GYPB-205ENST00000505583 SPHK1Q9NYA1 384 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 GPR83Q9NYM4 423 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.66□□□□□ -1.5
GYPB-205ENST00000505583 EGFL7Q9UHF1 273 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 CRLS1Q9UJA2 301 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ICKQ9UPZ9 632 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 CDYLQ9Y232 598 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.66□□□□□ -1.5
GYPB-205ENST00000505583 PRSS21Q9Y6M0 314 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 COLEC10Q9Y6Z7 277 aa5.66□□□□□ -1.5
GYPB-205ENST00000505583 ANKRD12Q6UB98 2062 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms