RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 FMO5P49326 533 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CNN1P51911 297 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 RABGGTBP53611 331 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 HUNKP57058 714 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CD81P60033 236 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 HAND2P61296 217 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TGFB2P61812 414 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 PPP2CBP62714 309 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 PPP2CAP67775 309 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 PRKCZQ05513 592 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 MAD2L1Q13257 205 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 STIM1Q13586 685 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 EFTUD2Q15029 972 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ACKR1Q16570 336 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SYT16Q17RD7 645 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CTU2Q2VPK5 515 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SLC36A3Q495N2 470 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 HSP90B2PQ58FF3 399 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 AWAT1Q58HT5 328 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 Q5PR19 223 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 FAM46CQ5VWP2 391 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 C1QL3Q5VWW1 255 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 PRAMEF7Q5VXH5 474 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 NOTUMQ6P988 496 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 AAGABQ6PD74 315 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF474Q6S9Z5 364 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 FAM198BQ6UWH4 519 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 LRIG3Q6UXM1 1119 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 B3GLCTQ6Y288 498 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 Q6ZRM9 215 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 NANOGNBQ7Z5D8 188 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 WDR53Q7Z5U6 358 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SERPINA11Q86U17 422 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 RTN4RL2Q86UN3 420 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ANKRD46Q86W74 232 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF761Q86XN6 746 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 DENND6AQ8IWF6 608 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ABI1Q8IZP0 508 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 THEM5Q8N1Q8 247 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SPATA6LQ8N4H0 392 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 EXD3Q8N9H8 876 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 LRRC57Q8N9N7 239 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TERB1Q8NA31 727 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 OR56B1Q8NGI3 324 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 OR4A16Q8NH70 328 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 GANCQ8TET4 914 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CKAP2Q8WWK9 683 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 RAPGEF5Q92565 580 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SLC25A28Q96A46 364 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 THOC3Q96J01 351 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TPD52L3Q96J77 140 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 RPGRIP1Q96KN7 1286 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 NECTIN4Q96NY8 510 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 OR6C1Q96RD1 312 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CDK5RAP1Q96SZ6 601 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 NFKBIZQ9BYH8 718 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 PRRG4Q9BZD6 226 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TMEM39BQ9GZU3 492 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 FAM192AQ9GZU8 254 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF768Q9H5H4 540 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SEC61A2Q9H9S3 476 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 MSL2Q9HCI7 577 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 VAT1LQ9HCJ6 419 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 DDX4Q9NQI0 724 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 YAE1D1Q9NRH1 226 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 FAM114A2Q9NRY5 505 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CYSLTR2Q9NS75 346 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 HOMER3Q9NSC5 361 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TRNAU1APQ9NX07 287 aaKnown RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 HOXC10Q9NYD6 342 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TXNDC16Q9P2K2 825 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 COPS7AQ9UBW8 275 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 SLC9A2Q9UBY0 812 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 TTC7AQ9ULT0 858 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 ST3GAL5Q9UNP4 418 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 GPR132Q9UNW8 380 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 KCNJ14Q9UNX9 436 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 CHST2Q9Y4C5 530 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 WNT6Q9Y6F9 365 aa3.54□□□□□ -1.84
HMGB1P22-201ENST00000505315 MST1RQ04912 1400 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF335Q9H4Z2 1342 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 C17orf102A2RUQ5 167 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TRIM49BA6NDI0 452 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 NCF1BA6NI72 391 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZSCAN5BA6NJL1 495 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 NCF1CA8MVU1 366 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 KCNU1A8MYU2 1149 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 AHRRA9YTQ3 701 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 J3QR06 171 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 K7EQM0 130 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CXCL11O14625 94 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PRRG1O14668 218 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CYP27B1O15528 508 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 AKAP8O43823 692 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ATG13O75143 517 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TOM1L1O75674 476 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TOMM70O94826 608 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms