RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ATAD3CQ5T2N8 411 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF618Q5T7W0 954 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF470Q6ECI4 717 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF438Q7Z4V0 828 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FGD2Q7Z6J4 655 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CMC1Q7Z7K0 106 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CNTD1Q8N815 330 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FNDC5Q8NAU1 212 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MINDY2Q8NBR6 621 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 OR6J1Q8NGC5 347 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DDI1Q8WTU0 396 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CKAP2Q8WWK9 683 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 BAP1Q92560 729 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TESCQ96BS2 214 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NARS2Q96I59 477 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TPD52L3Q96J77 140 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NSMCE2Q96MF7 247 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PGLYRP2Q96PD5 576 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FDXACB1Q9BRP7 624 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 COPS4Q9BT78 406 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PAPOLGQ9BWT3 736 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPS26Q9BYN8 205 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 POFUT1Q9H488 388 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 WDR55Q9H6Y2 383 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 LRRC40Q9H9A6 602 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SYBUQ9NX95 663 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SMPD4Q9NXE4 827 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FBXL12Q9NXK8 326 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CTSFQ9UBX1 484 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PRELID3BQ9Y3B1 194 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 BACE2Q9Y5Z0 518 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ATRNL1Q5VV63 1379 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CACNA1CQ13936 2221 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 GNG14A0A1W2PPG7 69 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PITPNM1O00562 1244 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CYB561D2O14569 222 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 OGTO15294 1046 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SYNCRIPO60506 623 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MAOBP27338 520 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 HLA-FP30511 346 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 HNRNPH3P31942 346 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DSG3P32926 999 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 GP5P40197 560 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 EIF2S3P41091 472 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CYP4F8P98187 520 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 RAD51Q06609 339 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 EFEMP1Q12805 493 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ORC2Q13416 577 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DNASE1L3Q13609 305 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FASTKQ14296 549 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ASTE1Q2TB18 679 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PARP15Q460N3 678 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 AASDHQ4L235 1098 aaPredicted RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SYTL3Q4VX76 610 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 GNASQ5JWF2 1037 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PPM1LQ5SGD2 360 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM171A1Q5VUB5 890 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NXNL2Q5VZ03 156 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 OR5M10Q6IEU7 315 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NOTUMQ6P988 496 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 BRAT1Q6PJG6 821 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TLK2Q86UE8 772 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM126BQ8IXS8 530 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ABRAQ8N0Z2 381 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DHRSXQ8N5I4 330 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM156AQ8NDB6 213 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SRFBP1Q8NEF9 429 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 OR4D10Q8NGI6 311 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PSMA8Q8TAA3 256 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 UFD1Q92890 307 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM120BQ96EK7 910 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TSPAN17Q96FV3 270 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 FOPNLQ96NB1 174 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ZIC5Q96T25 663 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 NPAS1Q99742 590 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SF3B5Q9BWJ5 86 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TEX12Q9BXU0 123 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SYNDIG1Q9H7V2 258 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ACTR8Q9H981 624 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MOV10Q9HCE1 1003 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MID1IP1Q9NPA3 183 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ENTPD7Q9NQZ7 604 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ARL8BQ9NVJ2 186 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 SMOXQ9NWM0 555 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DPP3Q9NY33 737 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 COL20A1Q9P218 1284 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DCDC2Q9UHG0 476 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TRMT6Q9UJA5 497 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 DRG1Q9Y295 367 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TESMINQ9Y4I5 508 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 HES2Q9Y543 173 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PCDHB3Q9Y5E6 796 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 ACTL7AQ9Y615 435 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 PLXNB2O15031 1838 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A0G2JPF8 293 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 MAGEB16A2A368 324 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 CASTOR2A6NHX0 329 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 TRPC5OSA6NMA1 111 aa3.61□□□□□ -1.83
PCDH11X-208ENST00000504220 HNRNPCL3B7ZW38 293 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms