RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CLCA1A8K7I4 914 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 BCKDKO14874 412 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 NPC1O15118 1278 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ALOX15BO15296 676 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SSX4O60224 188 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 MAFKO60675 156 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PAK4O96013 591 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ANXA5P08758 320 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RARAP10276 462 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 BRAFP15056 766 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CD36P16671 472 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 HNRNPA2B1P22626 353 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RBP5P82980 135 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ORC1Q13415 861 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ANKRD22Q5VYY1 191 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 C16orf89Q6UX73 402 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 LINGO2Q7L985 606 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SPRED1Q7Z699 444 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZBTB38Q8NAP3 1195 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 C8orf58Q8NAV2 365 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 GMCL1P1Q8NEA9 526 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 FAM46DQ8NEK8 389 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 KCNJ15Q99712 375 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CBWD1Q9BRT8 395 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 KAT8Q9H7Z6 458 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 NDOR1Q9UHB4 597 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CLCA3PQ9Y6N3 262 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 A0A0U1RQJ8 604 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 OR5K4A6NMS3 321 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 H3BN98 237 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CYR61O00622 381 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 KCNK3O14649 394 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ABCD4O14678 606 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 LRRTM2O43300 516 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 LCMT2O60294 686 aaKnown RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 PDE8BO95263 885 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CYB5R3P00387 301 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RLN2P04090 185 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF8P17098 575 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CYP3A5P20815 502 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RPS3P23396 243 aaKnown RBP eCLIP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 CXCR5P32302 372 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ALDH1A3P47895 512 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TFDP2Q14188 446 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 ARMC12Q5T9G4 340 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 C1orf189Q5VU69 101 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 WDR74Q6RFH5 385 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SMARCD3Q6STE5 483 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 UNC5AQ6ZN44 842 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RTL4Q6ZR62 310 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 NRROSQ86YC3 692 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TRAPPC5Q8IUR0 188 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SLC7A14Q8TBB6 771 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 UFD1Q92890 307 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 SLC41A3Q96GZ6 507 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 BCL2L14Q9BZR8 327 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 GAL3ST2Q9H3Q3 398 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 C11orf16Q9NQ32 467 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 TDP1Q9NUW8 608 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 NAALADL1Q9UQQ1 740 aa6.16□□□□□ -1.42
CLCN3-204ENST00000504131 FAM237AA0A1B0GTK4 181 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 POTEMA6NI47 508 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 LRRN3E7EW58 273 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 NFKBIEO00221 500 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 UGDHO60701 494 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SUPT20HL2P0C7V6 817 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DRD4P21917 467 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 GRIA4P48058 902 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 GPR15P49685 360 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 RNF144AP50876 292 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 MYL7Q01449 175 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TFDP3Q5H9I0 405 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 OR6B2Q6IFH4 312 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 POTEGQ6S5H5 508 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF517Q6ZMY9 492 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TDRPQ86YL5 185 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DAW1Q8N136 415 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 APBB2Q92870 758 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 OR14A2Q96R54 314 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 LRRN3Q9H3W5 708 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 GOLPH3Q9H4A6 298 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DPP3Q9NY33 737 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 NLGN3Q9NZ94 848 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 MYEF2Q9P2K5 600 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ENPP5Q9UJA9 477 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 PCDHA3Q9Y5H8 950 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 PCDHA1Q9Y5I3 950 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SLCO1B1Q9Y6L6 691 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DIP2CQ9Y2E4 1556 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L3A6NCW0 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 CHURC1-FNTBB4DL54 471 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L15C9J2P7 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L10C9JJH3 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L12C9JPN9 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L11C9JVI0 530 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms